RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 DNPEPQ9ULA0 475 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 DRG1Q9Y295 367 aaKnown RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 ATP8A1Q9Y2Q0 1164 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 FCF1Q9Y324 198 aaKnown RBP12.26□□□□□ -0.45
APOC1-206ENST00000590334 EML5Q05BV3 1969 aa12.26□□□□□ -0.45
APOC1-206ENST00000590334 CFAP69A5D8W1 941 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 KCNK1O00180 336 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 PDE2AO00408 941 aaPredicted RBP12.25□□□□□ -0.45
APOC1-206ENST00000590334 KRIT1O00522 736 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 ALOX15BO15296 676 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
APOC1-206ENST00000590334 EPHX1P07099 455 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 HOXB2P14652 356 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 PAFAH1B1P43034 410 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 CSNK1DP48730 415 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 ZBTB17Q13105 803 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 ACCSLQ4AC99 568 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 TEX44Q53QW1 395 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 DARS2Q6PI48 645 aaKnown RBP12.25□□□□□ -0.45
APOC1-206ENST00000590334 Q6ZVU0 165 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 B4GALNT4Q76KP1 1039 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 BBS5Q8N3I7 341 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 PGBD5Q8N414 524 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 CNTD1Q8N815 330 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 TSEN2Q8NCE0 465 aaKnown RBP12.25□□□□□ -0.45
APOC1-206ENST00000590334 OR2AP1Q8NGE2 309 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 OR2A12Q8NGT7 310 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 VOPP1Q96AW1 172 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 CAPZA3Q96KX2 299 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 FERMT1Q9BQL6 677 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 MGME1Q9BQP7 344 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
APOC1-206ENST00000590334 AP1M1Q9BXS5 423 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 FBRSQ9HAH7 460 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 PRSS16Q9NQE7 514 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 HAUS2Q9NVX0 235 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 CDC23Q9UJX2 597 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 TRHDEQ9UKU6 1024 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 BPTFQ12830 3046 aa12.25□□□□□ -0.45
APOC1-206ENST00000590334 GOLGA6L10A0A0M3HER8 536 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 C5orf60A6NFR6 353 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 RNF103O00237 685 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 MUSKO15146 869 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 PHF2O75151 1096 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 SIN3BO75182 1162 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 URI1O94763 535 aaPredicted RBP12.24□□□□□ -0.45
APOC1-206ENST00000590334 JCHAINP01591 159 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 HLA-EP13747 358 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 CR2P20023 1033 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 COL9A1P20849 921 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 PTPN3P26045 913 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 STIP1P31948 543 aaKnown RBP12.24□□□□□ -0.45
APOC1-206ENST00000590334 WASP42768 502 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 RHOAP61586 193 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 SNRPD1P62314 119 aaKnown RBP12.24□□□□□ -0.45
APOC1-206ENST00000590334 MTAPQ13126 283 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 ELAVL3Q14576 367 aaKnown RBP12.24□□□□□ -0.45
APOC1-206ENST00000590334 ZNF235Q14590 738 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 CRY1Q16526 586 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 CARD16Q5EG05 197 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 RALGPS1Q5JS13 557 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 TMEM92Q6UXU6 159 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 ZNF366Q8N895 744 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 ZNF592Q92610 1267 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 TEKT5Q96M29 485 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 CCDC114Q96M63 670 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 GDAP1L1Q96MZ0 367 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 TMEM121Q9BTD3 319 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 TNKS2Q9H2K2 1166 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 MTG2Q9H4K7 406 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 C11orf16Q9NQ32 467 aa12.24□□□□□ -0.45
APOC1-206ENST00000590334 RBM22Q9NW64 420 aaKnown RBP eCLIP12.24□□□□□ -0.45
APOC1-206ENST00000590334 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 CCDC188H7C350 402 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 KCNN4O15554 427 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 SYNCRIPO60506 623 aaKnown RBP12.23□□□□□ -0.45
APOC1-206ENST00000590334 GPR37L1O60883 481 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 GCATO75600 419 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 IGSF6O95976 241 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 HLA-DQB2P05538 268 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 CES1P23141 567 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 RGRP47804 291 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 FNTAP49354 379 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 CCNHP51946 323 aaPredicted RBP12.23□□□□□ -0.45
APOC1-206ENST00000590334 DGKEP52429 567 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 COPAP53621 1224 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 SNX1Q13596 522 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 STARD3Q14849 445 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 WHAMMP3Q1A5X7 153 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 MYLK3Q32MK0 819 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 KIAA1211LQ6NV74 962 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 TTC27Q6P3X3 843 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 DPY19L3Q6ZPD9 716 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 ZNF567Q8N184 647 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 TMEM105Q8N8V8 129 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 OR2T3Q8NH03 318 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 MAGOHBQ96A72 148 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms