RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SNX10Q9Y5X0 201 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 WASF2Q9Y6W5 498 aa13.05□□□□□ -0.32
PRKCSH-210ENST00000589990 PRAMEF33A0A0G2JMD5 474 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 IGLON5A6NGN9 336 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 E5RJQ4 531 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 TPP1O14773 563 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 YY2O15391 372 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 PRAMEF10O60809 474 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 EPB41P11171 864 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 CR2P20023 1033 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 ETV5P41161 510 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 YWHAEP62258 255 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 CCL7P80098 99 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 PKP1Q13835 747 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 ALFQ53S48 1182 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 DPY19L3Q6ZPD9 716 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 RRAGAQ7L523 313 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 DCP2Q8IU60 420 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 SLC35C1Q96A29 364 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 SEMA3CQ99985 751 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 MUC3BQ9H195 1237 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 ANLNQ9NQW6 1124 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 DYRK4Q9NR20 520 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 FOXJ2Q9P0K8 574 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 SIRPGQ9P1W8 387 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 APOBEC3BQ9UH17 382 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 IPO11Q9UI26 975 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 PADI4Q9UM07 663 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 ACTL7AQ9Y615 435 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 HS3ST4Q9Y661 456 aa13.04□□□□□ -0.32
PRKCSH-210ENST00000589990 A0A0D9SEW6 157 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 CLEC18AA5D8T8 446 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 D6RAR5 112 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 I6L893 689 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 STX10O60499 249 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 LIPCP11150 499 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 ADRB3P13945 408 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 TSHRP16473 764 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 ABL2P42684 1182 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 RABIFP47224 123 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 PMS1P54277 932 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 PFN3P60673 137 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 RPS21P63220 83 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 EDRF1Q3B7T1 1238 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 C22orf39Q6P5X5 142 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 CLEC18BQ6UXF7 455 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 PARS2Q7L3T8 475 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 ARHGEF19Q8IW93 802 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 PHACTR4Q8IZ21 702 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 SDR16C5Q8N3Y7 309 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 KYQ8NBH2 561 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 CLEC18CQ8NCF0 446 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 JPH3Q8WXH2 748 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 RNF34Q969K3 372 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 CCDC74AQ96AQ1 378 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 SLC4A5Q9BY07 1137 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 SLC25A18Q9H1K4 315 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 POPDC2Q9HBU9 364 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 ACP6Q9NPH0 428 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 DDIT4Q9NX09 232 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 NCKIPSDQ9NZQ3 722 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 RCOR1Q9UKL0 485 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 ACSL6Q9UKU0 697 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 TBC1D30Q9Y2I9 924 aa13.03□□□□□ -0.32
PRKCSH-210ENST00000589990 SPTBN1Q01082 2364 aaKnown RBP13.02□□□□□ -0.32
PRKCSH-210ENST00000589990 ITPR2Q14571 2701 aa13.02□□□□□ -0.32
PRKCSH-210ENST00000589990 LMO7DNF2Z398 122 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 FPGTO14772 594 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 CETN3O15182 167 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 PPFIA2O75334 1257 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 GRAP2O75791 330 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 F13A1P00488 732 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 PRNPP04156 253 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 TBXAS1P24557 533 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 GKP32189 559 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 NEK3P51956 506 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 NDUFA8P51970 172 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 MANEAQ5SRI9 462 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 KIAA1161Q6NSJ0 714 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 XKR5Q6UX68 686 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 SFTPA2Q8IWL1 248 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 DEFB106AQ8N104 65 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 NAT6Q93015 286 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 VOPP1Q96AW1 172 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 GEMIN8Q9NWZ8 242 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms