RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 LCA5LO95447 670 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 POP4O95707 220 aaKnown RBP16.71■□□□□ 0.27
DNMT1-221ENST00000589538 CTSLP07711 333 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 TCF4P15884 667 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 FECHP22830 423 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 NUDT1P36639 197 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 MAGEA1P43355 309 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 CCR5P51681 352 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 ADPRHP54922 357 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 CDH6P55285 790 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 IRX4P78413 519 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 MESDQ14696 234 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 PDK2Q15119 407 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 ARSIQ5FYB1 569 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 AFMIDQ63HM1 303 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 NCEH1Q6PIU2 408 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-221ENST00000589538 FAM71BQ8TC56 605 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 GDAP1L1Q96MZ0 367 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 OSBPL1AQ9BXW6 950 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 HDAC8Q9BY41 377 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 TM6SF2Q9BZW4 377 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 ZDHHC5Q9C0B5 715 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 MIR1-1HGQ9H1L0 117 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 CAPN10Q9HC96 672 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 PCDH18Q9HCL0 1135 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 PREBQ9HCU5 417 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 DLL3Q9NYJ7 618 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 HECAQ9UBI9 543 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-221ENST00000589538 NUMA1Q14980 2115 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 GON4LQ3T8J9 2241 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 FAM47DPA6NHR8 397 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 PATE3B3GLJ2 98 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 SLC30A4O14863 429 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 PLRG1O43660 514 aaKnown RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 LEFTY1O75610 366 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TMCC1O94876 653 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 FSBPO95073 299 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 IGSF6O95976 241 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 CD27P26842 260 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 MAOBP27338 520 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 SLC1A1P43005 524 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 PAPOLAP51003 745 aaKnown RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 ATXN3P54252 364 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 RFTN1Q14699 578 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TMCO4Q5TGY1 634 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TXNRD3NBQ6F5E7 133 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TCEAL6Q6IPX3 200 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 LRRC49Q8IUZ0 686 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 RYBPQ8N488 228 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 KCTD6Q8NC69 237 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 CHST14Q8NCH0 376 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 GRIN3AQ8TCU5 1115 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TCEAL3Q969E4 200 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 BIRC7Q96CA5 298 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 RMDN1Q96DB5 314 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 CELF6Q96J87 481 aaKnown RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 CALR3Q96L12 384 aaKnown RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 SLC39A8Q9C0K1 460 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 KLC2Q9H0B6 622 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 ZDHHC6Q9H6R6 413 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TMEM9BQ9NQ34 198 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 EIF2B4Q9UI10 523 aaKnown RBP16.7■□□□□ 0.26
DNMT1-221ENST00000589538 ACTL7AQ9Y615 435 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 WASF2Q9Y6W5 498 aa16.7■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3DA0A087WVF3 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3IA0A087WXS9 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3EA0A087X179 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3KA0A087X1G2 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3FA6NER0 549 aaPredicted RBP16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3LB9A6J9 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 DFFAO00273 331 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 GDF9O60383 454 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3HP0C7X1 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ENGP17813 658 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 AMPD1P23109 780 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ITGB7P26010 798 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 AFF3P51826 1226 aaKnown RBP16.69■□□□□ 0.26
DNMT1-221ENST00000589538 HADHBP55084 474 aaKnown RBP16.69■□□□□ 0.26
DNMT1-221ENST00000589538 RHOAP61586 193 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 IL10RBQ08334 325 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 GRM3Q14832 879 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TEAD4Q15561 434 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 MYLK3Q32MK0 819 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ZFYVE27Q5T4F4 411 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 STPG1Q5TH74 334 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 AGBL4Q5VU57 503 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3GQ6DHY5 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3CQ6IPX1 549 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 NEK5Q6P3R8 708 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ERN2Q76MJ5 926 aaKnown RBP16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ARHGAP12Q8IWW6 846 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TBC1D3Q8IZP1 549 aaPredicted RBP16.69■□□□□ 0.26
DNMT1-221ENST00000589538 TSC1Q92574 1164 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ZNF599Q96NL3 588 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 ZNF670Q9BS34 389 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 SP110Q9HB58 689 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 PDFQ9HBH1 243 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 MFHAS1Q9Y4C4 1052 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms