RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	CYP4X1	Q8N118	509 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	KCNV2	Q8TDN2	545 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	LRRC39	Q96DD0	335 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	C17orf80	Q9BSJ5	609 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	TMCO1	Q9UM00	188 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	RPS6KL1	Q9Y6S9	549 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	C2orf71	A6NGG8	1288 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	NRG2	O14511	850 aa	Predicted RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	CDH16	O75309	829 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	DCTN3	O75935	186 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	OLFM2	O95897	454 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	HARS2	P49590	506 aa	Known RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	OLIG2	Q13516	323 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	KPNB1	Q14974	876 aa	Known RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	EFTUD2	Q15029	972 aa	Known RBP eCLIP	15.66	■□□□□ 0.1	8e-7	■■■■□ 26.6
DDX39A-209	ENST00000589318	GAREM2	Q75VX8	874 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	PALM2	Q8IXS6	379 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MRPL43	Q8N983	215 aa	Known RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MAML1	Q92585	1016 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	AZIN2	Q96A70	460 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	HMCES	Q96FZ2	354 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	PRICKLE1	Q96MT3	831 aa	Predicted RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	CCDC77	Q9BR77	488 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	ACSS3	Q9H6R3	686 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	IPO11	Q9UI26	975 aa	Known RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MYO7A	Q13402	2215 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	TCRBV9S1A1T	A0A576	114 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	RASA4B	C9J798	803 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	NVL	O15381	856 aa	Known RBP	15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	RASA4	O43374	803 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	AP2A1	O95782	977 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	C8A	P07357	584 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	MYOG	P15173	224 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	CORO1A	P31146	461 aa	Known RBP	15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	PHB	P35232	272 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	RANBP1	P43487	201 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	PTDSS1	P48651	473 aa	Known RBP	15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	SLC11A2	P49281	568 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	ZXDB	P98169	803 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	CAMK1	Q14012	370 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	PLPP4	Q5VZY2	271 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	ITPRIPL1	Q6GPH6	555 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	LCA5	Q86VQ0	697 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	DENND1C	Q8IV53	801 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	HS6ST3	Q8IZP7	471 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	LGI2	Q8N0V4	545 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	KREMEN2	Q8NCW0	462 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	ADAMTS19	Q8TE59	1207 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	USP33	Q8TEY7	942 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	POF1B	Q8WVV4	589 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	FATE1	Q969F0	183 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	CYP2S1	Q96SQ9	504 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	TRIM56	Q9BRZ2	755 aa	Known RBP	15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	ENTPD7	Q9NQZ7	604 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	DLGAP2	Q9P1A6	1054 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	ATXN10	Q9UBB4	475 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	NKX1-2	Q9UD57	310 aa	Predicted RBP	15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	FETUB	Q9UGM5	382 aa		15.65	■□□□□ 0.1
DDX39A-209	ENST00000589318	ARHGAP42	A6NI28	874 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	FOXO6	A8MYZ6	492 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	C5orf67	F2Z3F1	127 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318		F5H5T6	163 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318		H3BNC9	293 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	GREM1	O60565	184 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	PIAS1	O75925	651 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	PPARD	Q03181	441 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	SPARCL1	Q14515	664 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	TXNDC8	Q6A555	127 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	TIGD7	Q6NT04	549 aa	Predicted RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	OTOP3	Q7RTS5	596 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	EXOC3L1	Q86VI1	746 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	CFAP52	Q8N1V2	620 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	RIBC1	Q8N443	379 aa	Predicted RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	ARNTL2	Q8WYA1	636 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	NCSTN	Q92542	709 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	PTPRN2	Q92932	1015 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	OXNAD1	Q96HP4	312 aa	Predicted RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	EBNA1BP2	Q99848	306 aa	Known RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	DHRS4	Q9BTZ2	278 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	PIH1D1	Q9NWS0	290 aa	Known RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	LMCD1	Q9NZU5	365 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	ZC3H7B	Q9UGR2	993 aa	Known RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	AGO1	Q9UL18	857 aa	Known RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	TTLL3	Q9Y4R7	772 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	ACTL7B	Q9Y614	415 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	GMEB1	Q9Y692	573 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	RANBP2	P49792	3224 aa	Known RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318		J3KR12	359 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	SPAG6	O75602	509 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	CSPG5	O95196	566 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	HLA-DQB2	P05538	268 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	PYGL	P06737	847 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	PDHA1	P08559	390 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	MAPKAPK2	P49137	400 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	SGSH	P51688	502 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	RASA2	Q15283	850 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	SH2D4B	Q5SQS7	431 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	HHAT	Q5VTY9	493 aa		15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	FAM109B	Q6ICB4	259 aa	Predicted RBP	15.64	■□□□□ 0.09
DDX39A-209	ENST00000589318	CCDC149	Q6ZUS6	474 aa		15.64	■□□□□ 0.09

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms