RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
LRFN3-204ENST00000588831 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
LRFN3-204ENST00000588831 RPRD1BQ9NQG5 326 aaKnown RBP12.39□□□□□ -0.43
LRFN3-204ENST00000588831 DNAJC28Q9NX36 388 aa12.39□□□□□ -0.43
LRFN3-204ENST00000588831 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
LRFN3-204ENST00000588831 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
LRFN3-204ENST00000588831 PCDHGA8Q9Y5G5 932 aa12.39□□□□□ -0.43
LRFN3-204ENST00000588831 SLC15A5A6NIM6 579 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 GPR25O00155 361 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 RAD51BO15315 384 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 ICMTO60725 284 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CCNKO75909 580 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PTPRAP18433 802 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PLK1P53350 603 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 IRF9Q00978 393 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 ZNF460Q14592 562 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 KCTD2Q14681 263 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 FAM20CQ8IXL6 584 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 KCTD17Q8N5Z5 321 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PCDH20Q8N6Y1 951 aaKnown RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 RNF157Q96PX1 679 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CROCCQ5TZA2 2017 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 KRBA1A5PL33 1030 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 MEN1O00255 615 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 MED7O43513 233 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 STBD1O95210 358 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PPP1R26Q5T8A7 1209 aaPredicted RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 FBXL19Q6PCT2 694 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 Q6ZNX1 250 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PQLC3Q8N755 202 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 TMEM176AQ96HP8 235 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 STK39Q9UEW8 545 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 SLC39A10Q9ULF5 831 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PRRC2BQ5JSZ5 2229 aaKnown RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 TMX2-CTNND1H3BSU7 103 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 EPN2O95208 641 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CHRNGP07510 517 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 STAG3L1P0CL83 205 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 ACAT1P24752 427 aaKnown RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CXCR3P49682 368 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 GRM1Q13255 1194 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PPP1R3AQ16821 1122 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PAGE2BQ5JRK9 111 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 LRRC8EQ6NSJ5 796 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 POTEAQ6S8J7 498 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 IFNEQ86WN2 208 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 SNX32Q86XE0 403 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PLD6Q8N2A8 252 aaKnown RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 TTC30BQ8N4P2 665 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 ZNF781Q8N8C0 355 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CATSPER1Q8NEC5 780 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 BHLHE22Q8NFJ8 381 aaPredicted RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PIWIL2Q8TC59 973 aaKnown RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 SPATA33Q96N06 139 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 CIB1Q99828 191 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 REXO4Q9GZR2 422 aaKnown RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 TP63Q9H3D4 680 aaPredicted RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 PAK5Q9P286 719 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 KLHL8Q9P2G9 620 aaPredicted RBP12.38□□□□□ -0.43
LRFN3-204ENST00000588831 AP4E1Q9UPM8 1137 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 IPPQ9Y573 584 aa12.38□□□□□ -0.43
LRFN3-204ENST00000588831 ATAD5Q96QE3 1844 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 EVPLQ92817 2033 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 BPGMP07738 259 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 YAP1P46937 504 aaKnown RBP12.37□□□□□ -0.43
LRFN3-204ENST00000588831 PITX1P78337 314 aaPredicted RBP12.37□□□□□ -0.43
LRFN3-204ENST00000588831 POU5F1BQ06416 359 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 GPRASP2Q96D09 838 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
LRFN3-204ENST00000588831 POPDC2Q9HBU9 364 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 RALBP11234 206 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 PSMB4P28070 264 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 SLC10A2Q12908 348 aaPredicted RBP12.37□□□□□ -0.43
LRFN3-204ENST00000588831 PRPSAP1Q14558 356 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 CMPK2Q5EBM0 449 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 FAM209AQ5JX71 171 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 NIPAL1Q6NVV3 410 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 WDR49Q8IV35 697 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 FBXW8Q8N3Y1 598 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 COLGALT1Q8NBJ5 622 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 OR52K1Q8NGK4 314 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 GRIN3AQ8TCU5 1115 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 GLMNQ92990 594 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 GMLQ99445 158 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 EFHD1Q9BUP0 239 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 FRMD8Q9BZ67 464 aaPredicted RBP12.37□□□□□ -0.43
LRFN3-204ENST00000588831 XPNPEP3Q9NQH7 507 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 PDGFCQ9NRA1 345 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
LRFN3-204ENST00000588831 LAMA2P24043 3122 aaKnown RBP12.37□□□□□ -0.43
LRFN3-204ENST00000588831 H0YCG3 227 aa12.36□□□□□ -0.43
LRFN3-204ENST00000588831 HDCP19113 662 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms