RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF542PQ5EBM4 170 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 Q6ZSR6 202 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 PARS2Q7L3T8 475 aaKnown RBP18.8■□□□□ 0.6
CCDC43-204ENST00000588687 FAM71AQ8IYT1 594 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 ZNF248Q8NDW4 579 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 ZNF578Q96N58 590 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-204ENST00000588687 KLF6Q99612 283 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-204ENST00000588687 CEP44Q9C0F1 390 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 DYRK4Q9NR20 520 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 KLF15Q9UIH9 416 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 SSUH2Q9Y2M2 353 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 SPTY2D1-AS1A0A0U1RR47 76 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 ILVBLA1L0T0 632 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 CSO75390 466 aaKnown RBP18.79■□□□□ 0.6
CCDC43-204ENST00000588687 PCDH8O95206 1070 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 FGFR1OPO95684 399 aaKnown RBP18.79■□□□□ 0.6
CCDC43-204ENST00000588687 CSF2P04141 144 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 CXADRP78310 365 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 DEUP1Q05D60 604 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 C1QBPQ07021 282 aaKnown RBP18.79■□□□□ 0.6
CCDC43-204ENST00000588687 CCDC15Q0P6D6 951 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 SLC25A52Q3SY17 297 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 KIAA1161Q6NSJ0 714 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 ZNF783Q6ZMS7 281 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 PTAR1Q7Z6K3 402 aaPredicted RBP18.79■□□□□ 0.6
CCDC43-204ENST00000588687 XYLT1Q86Y38 959 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 FAM174AQ8TBP5 190 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 PPP1R16AQ96I34 528 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 DEPDC7Q96QD5 511 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 LGMNQ99538 433 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 USP29Q9HBJ7 922 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 DNAJC28Q9NX36 388 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 DNAJC12Q9UKB3 198 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 STAP1Q9ULZ2 295 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 ACTL7AQ9Y615 435 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 HS3ST3A1Q9Y663 406 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 RP1P56715 2156 aa18.79■□□□□ 0.6
CCDC43-204ENST00000588687 AP1G1O43747 822 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 USP12O75317 370 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 ENDOD1O94919 500 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 ALPPL2P10696 532 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 OR1E1P30953 314 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 KRT9P35527 623 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 LSSP48449 732 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 CCNHP51946 323 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-204ENST00000588687 HNRNPKP61978 463 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC43-204ENST00000588687 RPS21P63220 83 aaKnown RBP18.78■□□□□ 0.6
CCDC43-204ENST00000588687 SKOR1P84550 965 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 IGF2-ASQ6U949 168 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 PARGQ86W56 976 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 DCP2Q8IU60 420 aaKnown RBP18.78■□□□□ 0.6
CCDC43-204ENST00000588687 PCDH20Q8N6Y1 951 aaKnown RBP18.78■□□□□ 0.6
CCDC43-204ENST00000588687 DUSP23Q9BVJ7 150 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 SLC17A9Q9BYT1 436 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 SYNCQ9H7C4 482 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 POLR1BQ9H9Y6 1135 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 PIEZO2Q9H5I5 2752 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 MYO18BQ8IUG5 2567 aa18.78■□□□□ 0.6
CCDC43-204ENST00000588687 ERVH48-1M5A8F1 160 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 F9P00740 461 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 TGM2P21980 687 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 L1CAMP32004 1257 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 ABL2P42684 1182 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 SNX16P57768 344 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 RNASE9P60153 205 aaKnown RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 ERVPABLB-1P60509 514 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 HS1BP3Q53T59 392 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 ACBD5Q5T8D3 534 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 FAM102AQ5T9C2 384 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 MANEALQ5VSG8 457 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 ZCCHC8Q6NZY4 707 aaKnown RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 IFI44Q8TCB0 444 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 SNRNP27Q8WVK2 155 aaKnown RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 NAF1Q96HR8 494 aaKnown RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 HAPLN3Q96S86 360 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 C1QTNF2Q9BXJ5 285 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 GGT7Q9UJ14 662 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 TMEM59LQ9UK28 342 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 PNMA8BQ9ULN7 279 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 FCF1Q9Y324 198 aaKnown RBP18.77■□□□□ 0.6
CCDC43-204ENST00000588687 KIF26BQ2KJY2 2108 aa18.77■□□□□ 0.6
CCDC43-204ENST00000588687 NEMP2A6NFY4 417 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 PAK4O96013 591 aaPredicted RBP18.76■□□□□ 0.59
CCDC43-204ENST00000588687 PFN3P60673 137 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 GNA12Q03113 381 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
CCDC43-204ENST00000588687 ISXQ2M1V0 245 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 C2CD6Q53TS8 623 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 MIIPQ5JXC2 388 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 RETSATQ6NUM9 610 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 GUSBP11Q6P575 273 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 LRRC31Q6UY01 552 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 LSMEM2Q8N112 164 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 TMEM35BQ8NCS4 154 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 LENG8Q96PV6 779 aaPredicted RBP18.76■□□□□ 0.59
CCDC43-204ENST00000588687 HEPHQ9BQS7 1158 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 ZYG11BQ9C0D3 744 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 CPNE5Q9HCH3 593 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms