RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ATP11CQ8NB49 1132 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 OR52K1Q8NGK4 314 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 OSCP1Q8WVF1 389 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 MGME1Q9BQP7 344 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 POLR1EQ9GZS1 481 aaKnown RBP26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 PIH1D1Q9NWS0 290 aaKnown RBP26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 SEPT3Q9UH03 358 aa26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 SPTBN5Q9NRC6 3674 aaKnown RBP26.44■■□□□ 1.82
SCAMP4-210ENST00000588555 HLA-FP30511 346 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 ADRA1AP35348 466 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 LTBRP36941 435 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 PLK1P53350 603 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 DSC2Q02487 901 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 CYTH1Q15438 398 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 ATAT1Q5SQI0 421 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 CEP85LQ5SZL2 805 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 KDELC1Q6UW63 502 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 OBP2AQ9NY56 170 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 INTS6Q9UL03 887 aaKnown RBP26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 KIF26AQ9ULI4 1882 aaPredicted RBP26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 TYRP14679 529 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 TSHRP16473 764 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 ITKQ08881 620 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 MPP3Q13368 585 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 EML3Q32P44 896 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 PLEKHG6Q3KR16 790 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 ASTLQ6HA08 431 aaPredicted RBP26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 NAPEPLDQ6IQ20 393 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 CES5AQ6NT32 575 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 LINGO4Q6UY18 593 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 BPIFB1Q8TDL5 484 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 ASIC4Q96FT7 647 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 MRGPRX2Q96LB1 330 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 PLAC1Q9HBJ0 212 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 MED4Q9NPJ6 270 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 VPS45Q9NRW7 570 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 DUS2Q9NX74 493 aaKnown RBP26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 CLDND1Q9NY35 253 aa26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 COLQQ9Y215 455 aaPredicted RBP26.43■■□□□ 1.82
SCAMP4-210ENST00000588555 SSTR1P30872 391 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 CD86P42081 329 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 IFFO1Q0D2I5 559 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 GPS2Q13227 327 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 SLC12A1Q13621 1099 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 BBS5Q8N3I7 341 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 IPMKQ8NFU5 416 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 EBNA1BP2Q99848 306 aaKnown RBP26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 C2orf49Q9BVC5 232 aaPredicted RBP26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 TMEM109Q9BVC6 243 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 CINPQ9BW66 212 aaPredicted RBP26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 ABCB8Q9NUT2 735 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 DENND4AQ7Z401 1863 aa26.42■■□□□ 1.82
SCAMP4-210ENST00000588555 TTC24A2A3L6 582 aaPredicted RBP26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 HEPACAM2A8MVW5 462 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 GJB3O75712 270 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 SESN2P58004 480 aaPredicted RBP26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 INO80DQ53TQ3 878 aaPredicted RBP26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 LINC00523Q86TU6 105 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 ACDQ96AP0 544 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 MSLNLQ96KJ4 702 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 SEMA3CQ99985 751 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 TBL1YQ9BQ87 522 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 APOL2Q9BQE5 337 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 VPS37BQ9H9H4 285 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 EYSQ5T1H1 3165 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 A0A087WUV0 522 aaPredicted RBP26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 SDR42E2A6NKP2 422 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 OPA1O60313 960 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 PMPCBO75439 489 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 CYP17A1P05093 508 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 MGAT1P26572 445 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 RGRP47804 291 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 SKOR1P84550 965 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 DHCR24Q15392 516 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 TRIM68Q6AZZ1 485 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 DENND5AQ6IQ26 1287 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 CAPN12Q6ZSI9 719 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 PALM2Q8IXS6 379 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 MYADMQ96S97 322 aa26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 ZC3H7BQ9UGR2 993 aaKnown RBP26.41■■□□□ 1.82
SCAMP4-210ENST00000588555 TMCC1O94876 653 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 AGTP01019 485 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 CR2P20023 1033 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 WNT3AP56704 352 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 CRADDP78560 199 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 TANGO2Q6ICL3 276 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 RANBP10Q6VN20 620 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 C3orf62Q6ZUJ4 267 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 FICDQ9BVA6 458 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 BRWD1Q9NSI6 2320 aa26.4■■□□□ 1.82
SCAMP4-210ENST00000588555 MT-CO1P00395 513 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 CPP00450 1065 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 CDH17Q12864 832 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 PITRM1Q5JRX3 1037 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 ZNF557Q8N988 423 aaPredicted RBP26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 DNAAF3Q8N9W5 541 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 TRIM56Q9BRZ2 755 aaKnown RBP26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 HAUS2Q9NVX0 235 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 SYBUQ9NX95 663 aa26.39■■□□□ 1.82
SCAMP4-210ENST00000588555 TCEA3O75764 348 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms