RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 RNF14Q9UBS8 474 aa9.22□□□□□ -0.93
CIRBP-218ENST00000588344 TRHDEQ9UKU6 1024 aa9.22□□□□□ -0.93
CIRBP-218ENST00000588344 TTC7AQ9ULT0 858 aaPredicted RBP9.22□□□□□ -0.93
CIRBP-218ENST00000588344 SNX12Q9UMY4 172 aa9.22□□□□□ -0.93
CIRBP-218ENST00000588344 NCKAP1Q9Y2A7 1128 aa9.22□□□□□ -0.93
CIRBP-218ENST00000588344 TICRRQ7Z2Z1 1910 aa9.22□□□□□ -0.93
CIRBP-218ENST00000588344 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 USP27XA6NNY8 438 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 KIF2AO00139 706 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ENC1O14682 589 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 AXIN1O15169 862 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 SMAD6O43541 496 aaKnown RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 CEP104O60308 925 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ZNF821O75541 412 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 STK10O94804 968 aaKnown RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 PEX11BO96011 259 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 DNTTP04053 509 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 HLA-EP13747 358 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 STIP1P31948 543 aaKnown RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 CHRNA3P32297 505 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 MMP13P45452 471 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 SUOXP51687 545 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 COPAP53621 1224 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ETF1P62495 437 aaKnown RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 IFI35P80217 286 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 NOMO1Q15155 1222 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 TTC31Q49AM3 519 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 SLC45A4Q5BKX6 768 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 KIAA1211LQ6NV74 962 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 SLC36A4Q6YBV0 504 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 DPY19L3Q6ZPD9 716 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 Q6ZVU0 165 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 USP30Q70CQ3 517 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 CDKL3Q8IVW4 592 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 MAML2Q8IZL2 1156 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 NELL1Q92832 810 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 PPP1R16AQ96I34 528 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 MRGPRX1Q96LB2 322 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ZNF641Q96N77 438 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 PPP1R2P1Q96PQ5 205 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 TUBGCP5Q96RT8 1024 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 LGMNQ99538 433 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 NAPGQ99747 312 aaPredicted RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 POLR1EQ9GZS1 481 aaKnown RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ZDHHC4Q9NPG8 344 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ITM2CQ9NQX7 267 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 DYRK4Q9NR20 520 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 ZSCAN32Q9NX65 697 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 BCCIPQ9P287 314 aaKnown RBP eCLIP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 IL36AQ9UHA7 158 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 PPM1HQ9ULR3 514 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
CIRBP-218ENST00000588344 PCDHGA2Q9Y5H1 932 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 SAR1BQ9Y6B6 198 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 TECTAO75443 2155 aa9.21□□□□□ -0.94
CIRBP-218ENST00000588344 BCLAF3A2AJT9 711 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 CFAP69A5D8W1 941 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ANTXRLA6NF34 631 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 H7C0C1 242 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SLC7A4O43246 635 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 IL1BP01584 269 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 FGGP02679 453 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SP9P0CG40 484 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 RBP3P10745 1247 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 TDGF1P13385 188 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 GABRG2P18507 467 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 COL9A1P20849 921 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 CA4P22748 312 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 NFKBIAP25963 317 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SLC8A1P32418 973 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ATP5OP48047 213 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 CCNHP51946 323 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 PTPN5P54829 565 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 EIF3EP60228 445 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 AP1S1P61966 158 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 RPS14P62263 151 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 POLR2LP62875 67 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 OTUD4Q01804 1114 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 LMNB2Q03252 620 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ADCY2Q08462 1091 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SLC10A7Q0GE19 358 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 PRKD1Q15139 912 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 LLGL1Q15334 1064 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 CST6Q15828 149 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 CCNG2Q16589 344 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 TEX44Q53QW1 395 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SPDYCQ5MJ68 293 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 DCAF12L1Q5VU92 463 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 PAPD7Q5XG87 772 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 HEATR6Q6AI08 1181 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ANO7Q6IWH7 933 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 DRICH1Q6PGQ1 229 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 DARS2Q6PI48 645 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 NPNTQ6UXI9 565 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ARHGAP36Q6ZRI8 547 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SRLQ86TD4 932 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 MMAAQ8IVH4 418 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 TP53INP2Q8IXH6 220 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 482.3 ms