RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 GRM3Q14832 879 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CARD16Q5EG05 197 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CFAP58Q5T655 872 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 MFSD7Q6UXD7 560 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 USP30Q70CQ3 517 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CCNYQ8ND76 341 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 OR2A12Q8NGT7 310 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 RLN3Q8WXF3 142 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 KRT35Q92764 455 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 HINFPQ9BQA5 517 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 HEPHQ9BQS7 1158 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 OSBPL1AQ9BXW6 950 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 KLC2Q9H0B6 622 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 PDFQ9HBH1 243 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 USP36Q9P275 1121 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 GMEB2Q9UKD1 530 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 MFHAS1Q9Y4C4 1052 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CACNA1HO95180 2353 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 A0A0U1RQJ8 604 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 GOLGA6L9A6NEM1 432 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 C3orf70A6NLC5 250 aaPredicted RBP12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 KRIT1O00522 736 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 MID1O15344 667 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 CST8O60676 142 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 LMNAP02545 664 aaKnown RBP12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 CHRNA3P32297 505 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 SLC8A1P32418 973 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 NR2C2P49116 596 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 SRSF5Q13243 272 aaKnown RBP12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 LBRQ14739 615 aaKnown RBP12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 PDK1Q15118 436 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 SEL1L2Q5TEA6 688 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 SLC9A4Q6AI14 798 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 DPY19L3Q6ZPD9 716 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 FAM124AQ86V42 546 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 PQLC3Q8N755 202 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 NETO2Q8NC67 525 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 P3H4Q92791 437 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 HDAC11Q96DB2 347 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 LRIG1Q96JA1 1093 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 FERMT1Q9BQL6 677 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 BTBD1Q9H0C5 482 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 FBXL12Q9NXK8 326 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 NCDNQ9UBB6 729 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 FZD4Q9ULV1 537 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 INVSQ9Y283 1065 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 ACTL7AQ9Y615 435 aa12.07□□□□□ -0.48
SDHDP1-201ENST00000588055 hCG_1818297A0A087WSY0 165 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 A0A1W2PP55 124 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 MEI4A8MW99 385 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 HRO43593 1189 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 TJP3O95049 919 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 MAP3K6O95382 1288 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 POP4O95707 220 aaKnown RBP12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 IGLV3-19P01714 112 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 DPP6P42658 865 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 MMP13P45452 471 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 GBE1Q04446 702 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 MAP7D1Q3KQU3 841 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 ATXN7L2Q5T6C5 722 aaPredicted RBP12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 LAIR1Q6GTX8 287 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 ARHGAP36Q6ZRI8 547 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 HDDC3Q8N4P3 179 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 PLD5Q8N7P1 536 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 TMIEQ8NEW7 156 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 FOXJ1Q92949 421 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 FAM122AQ96E09 287 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 TOE1Q96GM8 510 aaKnown RBP12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 EXOC2Q96KP1 924 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 KCNF1Q9H3M0 494 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 SGK2Q9HBY8 427 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 ITM2CQ9NQX7 267 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 DTLQ9NZJ0 730 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 PACSIN2Q9UNF0 486 aaPredicted RBP12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 VPS13AQ96RL7 3174 aa12.06□□□□□ -0.48
SDHDP1-201ENST00000588055 SHROOM3Q8TF72 1996 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 NUP205Q92621 2012 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 LRRC72A6NJI9 287 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 SLC7A4O43246 635 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 KIF5CO60282 957 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 MAFKO60675 156 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 LEFTY1O75610 366 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 SEMA4FO95754 770 aa12.05□□□□□ -0.48
SDHDP1-201ENST00000588055 CD160O95971 181 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms