RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ADPRHP54922 357 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 CDH6P55285 790 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 IL10RBQ08334 325 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.764e-6■■□□□ 14.4
TPM4-207ENST00000588032 GRM3Q14832 879 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 MYLK3Q32MK0 819 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 ARSIQ5FYB1 569 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 TMCO4Q5TGY1 634 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 LRRC38Q5VT99 294 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 TXNRD3NBQ6F5E7 133 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 VSIG1Q86XK7 387 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 OR14C36Q8NHC7 312 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 BIRC7Q96CA5 298 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 CELF6Q96J87 481 aaKnown RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 GDAP1L1Q96MZ0 367 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 ZNF670Q9BS34 389 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 RTKNQ9BST9 563 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 OSBPL1AQ9BXW6 950 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 HDAC8Q9BY41 377 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 ZDHHC5Q9C0B5 715 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 C6orf106Q9H6K1 298 aaPredicted RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 UBA2Q9UBT2 640 aaPredicted RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 SERGEFQ9UGK8 458 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 EIF2B4Q9UI10 523 aaKnown RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 CDV3Q9UKY7 258 aaKnown RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 MFHAS1Q9Y4C4 1052 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 THADAQ6YHU6 1953 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 PIEZO1Q92508 2521 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 ABCA7Q8IZY2 2146 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3DA0A087WVF3 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3IA0A087WXS9 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3EA0A087X179 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3KA0A087X1G2 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 LNP1A1A4G5 178 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3FA6NER0 549 aaPredicted RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 FAM47DPA6NHR8 397 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 ZNF487B1APH4 448 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 PATE3B3GLJ2 98 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 C10orf142B7Z368 130 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3LB9A6J9 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 DFFAO00273 331 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 SLC30A4O14863 429 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 PLRG1O43660 514 aaKnown RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 LEFTY1O75610 366 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 PALMO75781 387 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TMCC1O94876 653 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 FSBPO95073 299 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 NDUFA10O95299 355 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 IGSF6O95976 241 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3HP0C7X1 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 IL4RP24394 825 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 ITGB7P26010 798 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 MAOBP27338 520 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 ID4P47928 161 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 CSNK1DP48730 415 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 RENBPP51606 427 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 RHOAP61586 193 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 NSUN2Q08J23 767 aaKnown RBP eCLIP10.27□□□□□ -0.77
TPM4-207ENST00000588032 CNTN1Q12860 1018 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TEAD4Q15561 434 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 RSPO4Q2I0M5 234 aaPredicted RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 ZFYVE27Q5T4F4 411 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3GQ6DHY5 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3CQ6IPX1 549 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 NCEH1Q6PIU2 408 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 ERN2Q76MJ5 926 aaKnown RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 ZSCAN30Q86W11 494 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 ARHGAP12Q8IWW6 846 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 TBC1D3Q8IZP1 549 aaPredicted RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 TXLNBQ8N3L3 684 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 RYBPQ8N488 228 aaPredicted RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 NPWQ8N729 165 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 CHST14Q8NCH0 376 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 HCAR2Q8TDS4 363 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 SKA1Q96BD8 255 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 BAG1Q99933 345 aaPredicted RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 CALN1Q9BXU9 219 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 CPEB1Q9BZB8 566 aaKnown RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 TM6SF2Q9BZW4 377 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 MIR1-1HGQ9H1L0 117 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 SMOC1Q9H4F8 434 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 SP110Q9HB58 689 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 PDFQ9HBH1 243 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 CAPN10Q9HC96 672 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 PREBQ9HCU5 417 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 DLL3Q9NYJ7 618 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 IPO11Q9UI26 975 aaKnown RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 ACTL7AQ9Y615 435 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 WASF2Q9Y6W5 498 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 ZFHX2Q9C0A1 2572 aaPredicted RBP10.27□□□□□ -0.77
TPM4-207ENST00000588032 SPAG17Q6Q759 2223 aa10.27□□□□□ -0.77
TPM4-207ENST00000588032 A0A1W2PPC4 97 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 TMEM110-MUSTN1A8MSY1 372 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 J3KR12 359 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 KRIT1O00522 736 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ARHGAP33O14559 1287 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms