RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 TPRG1LQ5T0D9 272 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 SETD3Q86TU7 594 aaPredicted RBP16.67■□□□□ 0.26
NPC1-205ENST00000587163 DCP2Q8IU60 420 aaKnown RBP16.67■□□□□ 0.26
NPC1-205ENST00000587163 DCAF4L2Q8NA75 395 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 SHC3Q92529 594 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 WBP1Q96G27 269 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 ATXN7L3BQ96GX2 97 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 VCPIP1Q96JH7 1222 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.67■□□□□ 0.26
NPC1-205ENST00000587163 DUSP23Q9BVJ7 150 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 USP29Q9HBJ7 922 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 PLCB1Q9NQ66 1216 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 SATB2Q9UPW6 733 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 FADS3Q9Y5Q0 445 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 CPED1A4D0V7 1026 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 PMS2P1A4D2B8 440 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 SPINT1O43278 529 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 ADRB3P13945 408 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 NME1P15531 152 aaKnown RBP16.66■□□□□ 0.26
NPC1-205ENST00000587163 NEK3P51956 506 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 RPS21P63220 83 aaKnown RBP16.66■□□□□ 0.26
NPC1-205ENST00000587163 PAK1Q13153 545 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 C3orf38Q5JPI3 329 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 BRMS1LQ5PSV4 323 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 GUSBP11Q6P575 273 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 KYAT3Q6YP21 454 aaKnown RBP16.66■□□□□ 0.26
NPC1-205ENST00000587163 FAM174AQ8TBP5 190 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 TTC9Q92623 222 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 NT5C3BQ969T7 300 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 PRR11Q96HE9 360 aaPredicted RBP16.66■□□□□ 0.26
NPC1-205ENST00000587163 FEM1CQ96JP0 617 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 SLC46A1Q96NT5 459 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 KLF6Q99612 283 aaPredicted RBP16.66■□□□□ 0.26
NPC1-205ENST00000587163 SPON2Q9BUD6 331 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 DPH1Q9BZG8 443 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 THSD1Q9NS62 852 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 APEX2Q9UBZ4 518 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 ZNF212Q9UDV6 495 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 ACTL7AQ9Y615 435 aa16.66■□□□□ 0.26
NPC1-205ENST00000587163 IGLV3-10A0A075B6K4 115 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 CAPN8A6NHC0 703 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 ZMPSTE24O75844 475 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 ITGB7P26010 798 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 OR1E1P30953 314 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 L1CAMP32004 1257 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 CLCN1P35523 988 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 RECQLP46063 649 aaPredicted RBP16.65■□□□□ 0.26
NPC1-205ENST00000587163 VAC14Q08AM6 782 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 DRAP1Q14919 205 aaPredicted RBP16.65■□□□□ 0.26
NPC1-205ENST00000587163 DEFB133Q30KQ1 61 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 KIAA1161Q6NSJ0 714 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 ZCCHC8Q6NZY4 707 aaKnown RBP16.65■□□□□ 0.26
NPC1-205ENST00000587163 CRTC1Q6UUV9 634 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 EFL1Q7Z2Z2 1120 aaKnown RBP16.65■□□□□ 0.26
NPC1-205ENST00000587163 SLC47A2Q86VL8 602 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 SNRNP27Q8WVK2 155 aaKnown RBP16.65■□□□□ 0.26
NPC1-205ENST00000587163 PPP1R16AQ96I34 528 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 FAM81BQ96LP2 452 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 C1orf74Q96LT6 269 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 TBCBQ99426 244 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 RRN3Q9NYV6 651 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPC1-205ENST00000587163 ENTPD2Q9Y5L3 495 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 CSNK1G3Q9Y6M4 447 aa16.65■□□□□ 0.26
NPC1-205ENST00000587163 FAM170AA1A519 330 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 EME2A4GXA9 379 aaPredicted RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 IGLON5A6NGN9 336 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 CYSRT1A8MQ03 144 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 AQP9O43315 295 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 SRGAP2O75044 1071 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 CD160O95971 181 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 PNMA6AP0CW24 399 aaPredicted RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 PON1P27169 355 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 KRT9P35527 623 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 SULT1E1P49888 294 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 DNA2P51530 1060 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 SKOR1P84550 965 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 PTK2Q05397 1052 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 DEUP1Q05D60 604 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 EIF2B5Q13144 721 aaKnown RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 PDE1CQ14123 709 aaPredicted RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 CARD16Q5EG05 197 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 PERM1Q5SV97 790 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 IGF2-ASQ6U949 168 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 LRRC31Q6UY01 552 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 PARS2Q7L3T8 475 aaKnown RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 PARGQ86W56 976 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 CREBRFQ8IUR6 639 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 LMX1AQ8TE12 382 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 LENG8Q96PV6 779 aaPredicted RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 HEPHQ9BQS7 1158 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 C1QTNF2Q9BXJ5 285 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 TCEAL2Q9H3H9 227 aaPredicted RBP16.64■□□□□ 0.25
NPC1-205ENST00000587163 SYNCQ9H7C4 482 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 SIX2Q9NPC8 291 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 EVA1BQ9NVM1 165 aa16.64■□□□□ 0.25
NPC1-205ENST00000587163 IPO11Q9UI26 975 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms