RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 DDX50Q9BQ39 737 aaKnown RBP10.36□□□□□ -0.75
APOC1-201ENST00000586638 APOL2Q9BQE5 337 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 TRIM56Q9BRZ2 755 aaKnown RBP10.36□□□□□ -0.75
APOC1-201ENST00000586638 TMEM109Q9BVC6 243 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 GLOD4Q9HC38 313 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 XAB2Q9HCS7 855 aaKnown RBP10.36□□□□□ -0.75
APOC1-201ENST00000586638 NT5MQ9NPB1 228 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 RBM22Q9NW64 420 aaKnown RBP eCLIP10.36□□□□□ -0.75
APOC1-201ENST00000586638 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 NOVA2Q9UNW9 492 aaKnown RBP10.36□□□□□ -0.75
APOC1-201ENST00000586638 SH3BP1Q9Y3L3 701 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 TEX264Q9Y6I9 313 aa10.36□□□□□ -0.75
APOC1-201ENST00000586638 A0A0D9SEW6 157 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 EXOC1LA0A1B0GW35 172 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 HMGB1P1B2RPK0 211 aaPredicted RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 LEFTY2O00292 366 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 RGS16O15492 202 aaPredicted RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 XYLBO75191 536 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 MT-CYBP00156 380 aaPredicted RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 IVLP07476 585 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 CEBPBP17676 345 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PTPN2P17706 415 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 GLDCP23378 1020 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 HOXA9P31269 272 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PHBP35232 272 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 ETFBP38117 255 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 MAXP61244 160 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 SARNPP82979 210 aaKnown RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 CDK16Q00536 496 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 GNA12Q03113 381 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PPARDQ03181 441 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 IL10RBQ08334 325 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PRPSAP1Q14558 356 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 STAT4Q14765 748 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 TMED2Q15363 201 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PARP15Q460N3 678 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 ARHGAP15Q53QZ3 475 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PRSS36Q5K4E3 855 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 ADGRF1Q5T601 910 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 KCTD11Q693B1 232 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 CXorf57Q6NSI4 855 aaKnown RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 LRRC8BQ6P9F7 803 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 TMC5Q6UXY8 1006 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 GRASPQ7Z6J2 395 aaPredicted RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 BBS7Q8IWZ6 715 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PALM2Q8IXS6 379 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 CARNMT1Q8N4J0 409 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 HJURPQ8NCD3 748 aaPredicted RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 OR52K1Q8NGK4 314 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 SPATA22Q8NHS9 363 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 WFDC5Q8TCV5 224 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 BHMTQ93088 406 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 ZNF707Q96C28 371 aaPredicted RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 MRRFQ96E11 262 aaKnown RBP10.35□□□□□ -0.75
APOC1-201ENST00000586638 STAMBPL1Q96FJ0 436 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 FICDQ9BVA6 458 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 SLC46A2Q9BY10 475 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 PLAC1Q9HBJ0 212 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 DONSONQ9NYP3 566 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 STOML2Q9UJZ1 356 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 CCL26Q9Y258 94 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 ACTL7AQ9Y615 435 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 MAD1L1Q9Y6D9 718 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 CHD8Q9HCK8 2581 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 MYOFQ9NZM1 2061 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 ANKRD36A6QL64 1941 aa10.35□□□□□ -0.75
APOC1-201ENST00000586638 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
APOC1-201ENST00000586638 FOXO6A8MYZ6 492 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 POC1B-GALNT4F8VUJ3 575 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 GFRA2O00451 464 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 PRAMEF11O60813 436 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 CLDN11O75508 207 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 PIAS1O75925 651 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 SUN1O94901 812 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 PRAMEF12O95522 483 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 FGF19O95750 216 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 HNRNPA1P09651 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
APOC1-201ENST00000586638 TSHRP16473 764 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 NR1D1P20393 614 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 GCAP28676 217 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 HPDP32754 393 aaPredicted RBP10.34□□□□□ -0.75
APOC1-201ENST00000586638 MMP13P45452 471 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 ID4P47928 161 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 YBEYP58557 167 aaPredicted RBP10.34□□□□□ -0.75
APOC1-201ENST00000586638 MAGOHP61326 146 aaKnown RBP10.34□□□□□ -0.75
APOC1-201ENST00000586638 DSC2Q02487 901 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 SLC10A7Q0GE19 358 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 USP4Q13107 963 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 TDGQ13569 410 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 TTC39BQ5VTQ0 682 aaPredicted RBP10.34□□□□□ -0.75
APOC1-201ENST00000586638 RNF219Q5W0B1 726 aaPredicted RBP10.34□□□□□ -0.75
APOC1-201ENST00000586638 IL31Q6EBC2 164 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 CASC4Q6P4E1 433 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 UNC5AQ6ZN44 842 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 ERMP1Q7Z2K6 904 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 LRRC49Q8IUZ0 686 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 FAM217AQ8IXS0 508 aa10.34□□□□□ -0.75
APOC1-201ENST00000586638 KLHDC8BQ8IXV7 354 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms