RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IGFBP6P24592 240 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 INHBEP58166 350 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TLR1Q15399 786 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZFP1Q6P2D0 407 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MARVELD2Q8N4S9 558 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CNTD1Q8N815 330 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZMIZ2Q8NF64 920 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RCN3Q96D15 328 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DCUN1D1Q96GG9 259 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SCYL1Q96KG9 808 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ABHD16BQ9H3Z7 469 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZBTB26Q9HCK0 441 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RRN3Q9NYV6 651 aa14.41□□□□□ -0.1
CDK5RAP3-237ENST00000585163 C15orf38-AP3S2A0A0A6YYH1 394 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PTGESO14684 152 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TADA2AO75478 443 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AP1G2O75843 785 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LRIG2O94898 1065 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 JUNP05412 331 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 XRCC1P18887 633 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TMEM198Q66K66 360 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 IQSEC1Q6DN90 963 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LRRC8EQ6NSJ5 796 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ARPINQ7Z6K5 226 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DPP9Q86TI2 863 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CNTN4Q8IWV2 1026 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MAML3Q96JK9 1138 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 WDCPQ9H6R7 721 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TMEM30AQ9NV96 361 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 BCAP29Q9UHQ4 241 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 G3BP2Q9UN86 482 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ACOT9Q9Y305 439 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SNX10Q9Y5X0 201 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 COMMD3-BMI1R4GMX3 469 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CCDC78A2IDD5 438 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PSMD3O43242 534 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DLX3O60479 287 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RTN3O95197 1032 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AVPR1AP37288 418 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CXCR3P49682 368 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MRPS22P82650 360 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZNF33AQ06730 810 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CEACAM7Q14002 265 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 UGP2Q16851 508 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RARS2Q5T160 578 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 OTOP3Q7RTS5 596 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FAM35AQ86V20 835 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PDCD6IPQ8WUM4 868 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CATSPER2Q96P56 530 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TKTL2Q9H0I9 626 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 XPR1Q9UBH6 696 aa14.4□□□□□ -0.1
CDK5RAP3-237ENST00000585163 BPTFQ12830 3046 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DNAJA2O60884 412 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 POLD2P49005 469 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ADAM17P78536 824 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DYNC1I2Q13409 638 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ADGRE1Q14246 886 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PPP2R5DQ14738 602 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PCID2Q5JVF3 399 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PKN3Q6P5Z2 889 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 BHLHA9Q7RTU4 235 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CTU1Q7Z7A3 348 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SLC41A1Q8IVJ1 513 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PCED1BQ96HM7 432 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 LRGUKQ96M69 825 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 GPR78Q96P69 363 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TSGA13Q96PP4 275 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PPP1R10Q96QC0 940 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TINF2Q9BSI4 451 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 EPB41L1Q9H4G0 881 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 WDR41Q9HAD4 459 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 EFCAB1Q9HAE3 211 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RIMS3Q9UJD0 308 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 AAR2Q9Y312 384 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 FNDC1Q4ZHG4 1894 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SMIM31A0A1B0GVY4 71 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MYBPHLA2RUH7 354 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DPP6P42658 865 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PKNOX1P55347 436 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RAB10P61026 200 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MS4A2Q01362 244 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RFTN1Q14699 578 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CNGA3Q16281 694 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NXNQ6DKJ4 435 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DCLRE1AQ6PJP8 1040 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TICAM1Q8IUC6 712 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 KDM1BQ8NB78 822 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CELF6Q96J87 481 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SENP8Q96LD8 212 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 VCX3AQ9NNX9 186 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RAB26Q9ULW5 256 aa14.39□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PGK1P00558 417 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ENO3P13929 434 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ME2P23368 584 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MSX2P35548 267 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 C1QTNF12Q5T7M4 302 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SATL1Q86VE3 508 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CEP97Q8IW35 865 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms