RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 TBC1D3DA0A087WVF3 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3IA0A087WXS9 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3EA0A087X179 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3KA0A087X1G2 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 A0A1W2PR77 199 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3FA6NER0 549 aaPredicted RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3LB9A6J9 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 AP1G1O43747 822 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 LRCH4O75427 683 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 LEFTY1O75610 366 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 CYP1A2P05177 515 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3HP0C7X1 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 ITGB7P26010 798 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 CD38P28907 300 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 MIPP30301 263 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 CSNK1EP49674 416 aaKnown RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 NUMBP49757 651 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 METAP1P53582 386 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TAS2R38P59533 333 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 SNRPD1P62314 119 aaKnown RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 SERINC3Q13530 473 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 PIGHQ14442 188 aaPredicted RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 HLA-BQ31612 363 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 UAP1L1Q3KQV9 507 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 BOLA3Q53S33 107 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TDRD12Q587J7 1177 aaKnown RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 CARD16Q5EG05 197 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 SPECC1LQ69YQ0 1117 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3GQ6DHY5 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3CQ6IPX1 549 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 GLRX5Q86SX6 157 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 PRPF39Q86UA1 669 aaKnown RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 TBC1D3Q8IZP1 549 aaPredicted RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 FAM174AQ8TBP5 190 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 SNRNP25Q9BV90 132 aaKnown RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 OSBPL1AQ9BXW6 950 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 XPO4Q9C0E2 1151 aaKnown RBP10.08□□□□□ -0.8
SKA2-208ENST00000583927 TSPY26PQ9H489 355 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 GAREM1Q9H706 876 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 LRRC19Q9H756 370 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 ERVMER34-1Q9H9K5 563 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 FSCN3Q9NQT6 498 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 NENFQ9UMX5 172 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 MFHAS1Q9Y4C4 1052 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 SLCO1B1Q9Y6L6 691 aa10.08□□□□□ -0.8
SKA2-208ENST00000583927 ZZEF1O43149 2961 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 A0A087X0T9 212 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 A0A1B0GVT2 93 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 SSU72P8A0A1W2PR75 194 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 FAM47DPA6NHR8 397 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 RASA4BC9J798 803 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 KPNA3O00505 521 aaPredicted RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 YKT6O15498 198 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 RASA4O43374 803 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 CREB3O43889 395 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 PRPSAP2O60256 369 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 PCDHGA12O60330 932 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 MAGEC1O60732 1142 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 CBFA2T3O75081 653 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 POP4O95707 220 aaKnown RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 FAM228BP0C875 321 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 CASP14P31944 242 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 CCNHP51946 323 aaPredicted RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 TPI1P60174 286 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 DPYSL2Q16555 572 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 KIF19Q2TAC6 998 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 SETMARQ53H47 684 aaPredicted RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 ARSIQ5FYB1 569 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 AFMIDQ63HM1 303 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 NAPEPLDQ6IQ20 393 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 ALKBH5Q6P6C2 394 aaKnown RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 ERN2Q76MJ5 926 aaKnown RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 LZTR1Q8N653 840 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 MFSD2AQ8NA29 543 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 CHST14Q8NCH0 376 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 DEFB124Q8NES8 71 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 OR2AP1Q8NGE2 309 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 OR8K1Q8NGG5 319 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 HCAR2Q8TDS4 363 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 TEKT4Q8WW24 435 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 RAB7BQ96AH8 199 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 VOPP1Q96AW1 172 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 ARRDC3Q96B67 414 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 PEBP4Q96S96 227 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 CPEB1Q9BZB8 566 aaKnown RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 TRIM7Q9C029 511 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 TNKS2Q9H2K2 1166 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 DYRK4Q9NR20 520 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 TM7SF3Q9NS93 570 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 HECAQ9UBI9 543 aaPredicted RBP10.07□□□□□ -0.8
SKA2-208ENST00000583927 LCMT1Q9UIC8 334 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 WASF3Q9UPY6 502 aa10.07□□□□□ -0.8
SKA2-208ENST00000583927 LAMA5O15230 3695 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 MYLKQ15746 1914 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 PRAMEF26H0Y7S4 382 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 EEF2KO00418 725 aaKnown RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 GIPC1O14908 333 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms