RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PRKAA2P54646 552 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 ARHGAP8P85298 464 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 FOXO1Q12778 655 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 COASYQ13057 564 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 MYBPC2Q14324 1141 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 HLFQ16534 295 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 ZNF628Q5EBL2 1059 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 C9orf57Q5W0N0 161 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 TBC1D9BQ66K14 1250 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
COPS3-217ENST00000583160 CUZD1Q86UP6 607 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 TMC8Q8IU68 726 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 CSGALNACT1Q8TDX6 532 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 POF1BQ8WVV4 589 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 GOLGA1Q92805 767 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 RTP4Q96DX8 246 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 SLITRK1Q96PX8 696 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 TXLNGQ9NUQ3 528 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 DAAM1Q9Y4D1 1078 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 CST5P28325 142 aaPredicted RBP4.28□□□□□ -1.72
COPS3-217ENST00000583160 ERVFC1-1P60608 527 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 THOC5Q13769 683 aaKnown RBP4.28□□□□□ -1.72
COPS3-217ENST00000583160 BYSLQ13895 437 aaKnown RBP4.28□□□□□ -1.72
COPS3-217ENST00000583160 TIGD6Q17RP2 521 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 AP5B1Q2VPB7 878 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 C9orf50Q5SZB4 431 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 H1FNTQ75WM6 255 aaPredicted RBP4.28□□□□□ -1.72
COPS3-217ENST00000583160 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 NEXN-AS1Q8NBZ9 246 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 KTI12Q96EK9 354 aaPredicted RBP4.28□□□□□ -1.72
COPS3-217ENST00000583160 FIZ1Q96SL8 496 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 SLC25A33Q9BSK2 321 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 C1QTNF4Q9BXJ3 329 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 ZNF556Q9HAH1 456 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 G6PC2Q9NQR9 355 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 OCIAD1Q9NX40 245 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 GRHL1Q9NZI5 618 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 GRHPRQ9UBQ7 328 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 SRP68Q9UHB9 627 aaKnown RBP4.28□□□□□ -1.72
COPS3-217ENST00000583160 ICAM5Q9UMF0 924 aa4.28□□□□□ -1.72
COPS3-217ENST00000583160 DENND3A2RUS2 1198 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 OR6C68A6NDL8 312 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 SMTNL1A8MU46 457 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 IPO5O00410 1097 aaKnown RBP4.27□□□□□ -1.73
COPS3-217ENST00000583160 KRT86O43790 486 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 SERPINI2O75830 405 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 METTL18O95568 372 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 CKMT1AP12532 417 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 YWHAQP27348 245 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 MTNR1AP48039 350 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 BNC1Q01954 994 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 EEF1A2Q05639 463 aaKnown RBP4.27□□□□□ -1.73
COPS3-217ENST00000583160 KRT81Q14533 505 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 IL13RA2Q14627 380 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 KIF19Q2TAC6 998 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 GALNT15Q8N3T1 639 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 TCP11L2Q8N4U5 519 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 VPS37AQ8NEZ2 397 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 NCSTNQ92542 709 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 RUBCNQ92622 972 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 ATOH1Q92858 354 aaPredicted RBP4.27□□□□□ -1.73
COPS3-217ENST00000583160 NPFFR1Q9GZQ6 430 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 CXorf56Q9H5V9 222 aa4.27□□□□□ -1.73
COPS3-217ENST00000583160 AGO1Q9UL18 857 aaKnown RBP4.27□□□□□ -1.73
COPS3-217ENST00000583160 A0A096LPK6 155 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 IGLV5-52A0A0A0MRZ9 124 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 LINC01553A4QN01 128 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 KDM4EB2RXH2 506 aaPredicted RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 FAM157AC9JC47 383 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 ZNF432O94892 652 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 CAMTA2O94983 1202 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 IL1AP01583 271 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 GJC1P36383 396 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 MCM2P49736 904 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 TUBA1BP68363 451 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
COPS3-217ENST00000583160 CHAF1AQ13111 956 aaPredicted RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 CUL4BQ13620 913 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 TRIM14Q14142 442 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 CTTNQ14247 550 aaKnown RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 SLC39A14Q15043 492 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 BRD3Q15059 726 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 ZNF484Q5JVG2 852 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 NCAPH2Q6IBW4 605 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 JMJD6Q6NYC1 403 aaPredicted RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 SETD9Q8NE22 299 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 LINS1Q8NG48 757 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 WFIKKN2Q8TEU8 576 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 LTV1Q96GA3 475 aaPredicted RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 DUX5Q96PT3 197 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 IL25Q9H293 177 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 DDX31Q9H8H2 851 aaKnown RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 CHODLQ9H9P2 273 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 TLR8Q9NR97 1041 aaKnown RBP4.26□□□□□ -1.73
COPS3-217ENST00000583160 NLKQ9UBE8 527 aa4.26□□□□□ -1.73
COPS3-217ENST00000583160 FBXO40Q9UH90 709 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms