RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TSNARE1Q96NA8 513 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 RGS18Q9NS28 235 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 IRAK4Q9NWZ3 460 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 MAGEA13PA6NCF6 341 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 PRR5-ARHGAP8B1AHC4 643 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 AOC2O75106 756 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 HSPA4LO95757 839 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 PRKCGP05129 697 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 MAXP61244 160 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 ARHGAP8P85298 464 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 CUL3Q13618 768 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 KRT72Q14CN4 511 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 STXBP5Q5T5C0 1151 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 VWA5B1Q5TIE3 1220 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 FAM171A1Q5VUB5 890 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 DENND6AQ8IWF6 608 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 DRAXINQ8NBI3 349 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 PPHLN1Q8NEY8 458 aaKnown RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 IPO11Q9UI26 975 aaKnown RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 SLC27A5Q9Y2P5 690 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 MATN3O15232 486 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 CPB1P15086 417 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 TBX4P57082 545 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 MPP1Q00013 466 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 PSMD5Q16401 504 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 INSCQ1MX18 579 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 ESRP1Q6NXG1 681 aaKnown RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 SCML4Q8N228 414 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 LZTR1Q8N653 840 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 CFAP61Q8NHU2 1237 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 EZH1Q92800 747 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 MOCOSQ96EN8 888 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 KLHL5Q96PQ7 755 aa13.87□□□□□ -0.19
SRSF1-205ENST00000582730 SEPT5Q99719 369 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 OXCT2Q9BYC2 517 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
SRSF1-205ENST00000582730 PSMD3O43242 534 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PGM1P36871 562 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 GEMP55040 296 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 ABCE1P61221 599 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 USP4Q13107 963 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 MGAT5BQ3V5L5 792 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 CCDC153Q494R4 210 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PCID2Q5JVF3 399 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PIK3R6Q5UE93 754 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PDPK2PQ6A1A2 396 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FAM43BQ6ZT52 329 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 KBTBD2Q8IY47 623 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 RTL3Q8N8U3 475 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PPFIBP2Q8ND30 876 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FBXO27Q8NI29 283 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FCRL5Q96RD9 977 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 DDX50Q9BQ39 737 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 SHCBP1LQ9BZQ2 653 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 NMRAL1Q9HBL8 299 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 NT5MQ9NPB1 228 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 SLC2A6Q9UGQ3 507 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 MEI4A8MW99 385 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 SPECC1L-ADORA2AF8WAN1 911 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 GRK2P25098 689 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 CST5P28325 142 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 ZNF460Q14592 562 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 TIGD7Q6NT04 549 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 SLC41A1Q8IVJ1 513 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 COLGALT2Q8IYK4 626 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■□□□ 13.8
SRSF1-205ENST00000582730 B4GALNT2Q8NHY0 566 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 RAET1EQ8TD07 263 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PPP1R36Q96LQ0 422 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 TSGA13Q96PP4 275 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FTHL17Q9BXU8 183 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 STX18Q9P2W9 335 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 WASF2Q9Y6W5 498 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 TK2O00142 265 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 AP3B1O00203 1094 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 MPOP05164 745 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 UBTFL6P0CB48 400 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 NCF2P19878 526 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 ARRB2P32121 409 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PBX3P40426 434 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 GATMP50440 423 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 CSE1LP55060 971 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 THOC5Q13769 683 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
SRSF1-205ENST00000582730 CNGA3Q16281 694 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 ANO4Q32M45 955 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 FAM26DQ5JW98 314 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 ATG14Q6ZNE5 492 aa13.86□□□□□ -0.19
SRSF1-205ENST00000582730 BEND5Q7L4P6 421 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms