RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SLC35F5Q8WV83 523 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 ZNF333Q96JL9 665 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 NPAS1Q99742 590 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 ARL15Q9NXU5 204 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 DAPP1Q9UN19 280 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 SLC45A1Q9Y2W3 748 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 PCDHA10Q9Y5I2 948 aa3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 SRPRBQ9Y5M8 271 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-206ENST00000581631 IGLV5-37A0A075B6J1 123 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 MBD3L5A6NJ08 208 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 F5H423 210 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 ACKR2O00590 384 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 ACTL6BO94805 426 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 SERPINF1P36955 418 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 RCAN1P53805 252 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 ICA1Q05084 483 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 UBE4AQ14139 1066 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 BRD3Q15059 726 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 RPS6KA2Q15349 733 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 RETSATQ6NUM9 610 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 NFRKBQ6P4R8 1299 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 TMEM200AQ86VY9 491 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 SLC44A2Q8IWA5 706 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 POF1BQ8WVV4 589 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 RSC1A1Q92681 617 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 EID2BQ96D98 161 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 GFRA4Q9GZZ7 299 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 ABHD16BQ9H3Z7 469 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 ELAC1Q9H777 363 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 PLCB1Q9NQ66 1216 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 PRDM8Q9NQV8 689 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 DACT1Q9NYF0 836 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 HERC5Q9UII4 1024 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 RAP2CQ9Y3L5 183 aa3.6□□□□□ -1.83
SMCHD1-206ENST00000581631 A0A0U1RQJ8 604 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 CCDC194A0A1B0GVG4 234 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 EFCAB8A8MWE9 144 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 HSPB6O14558 160 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 XPNPEP2O43895 674 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 SERPINI2O75830 405 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 TMCC1O94876 653 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 AMD1P17707 334 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 MXI1P50539 228 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 PNLIPRP1P54315 467 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 CDH12P55289 794 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 AP2B1P63010 937 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 DLG1Q12959 904 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 GALNTL6Q49A17 601 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 SETMARQ53H47 684 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 SULT6B1Q6IMI4 303 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 MARK2Q7KZI7 788 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 MON1BQ7L1V2 547 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 RRAGAQ7L523 313 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 RAB11FIP2Q7L804 512 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 ANKS1BQ7Z6G8 1248 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 CCDC117Q8IWD4 279 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 MIGA1Q8NAN2 632 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 POC1AQ8NBT0 407 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 HDAC7Q8WUI4 952 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 SORCS1Q8WY21 1168 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 C3orf49Q96BT1 292 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 BICD1Q96G01 975 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 RMDN3Q96TC7 470 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 MPHOSPH6Q99547 160 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 MMP28Q9H239 520 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 PABPC3Q9H361 631 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 TMEM248Q9NWD8 314 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 GAB2Q9UQC2 676 aa3.59□□□□□ -1.83
SMCHD1-206ENST00000581631 SAA2-SAA4A0A096LPE2 208 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 MAGEA13PA6NCF6 341 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 AFPP02771 609 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 HMGB1P09429 215 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 PRKCHP24723 683 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 SERPINA4P29622 427 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 C21orf33P30042 268 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 MYBPHQ13203 477 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 CTTNQ14247 550 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 MYBPC2Q14324 1141 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 TTC22Q5TAA0 569 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 FAM171A1Q5VUB5 890 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 SYNE3Q6ZMZ3 975 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 MYLK4Q86YV6 388 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 ZDHHC23Q8IYP9 409 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 SPICE1Q8N0Z3 855 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 CPT1BQ92523 772 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 SLC39A13Q96H72 371 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 UHRF2Q96PU4 802 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 HDHD5Q9BXW7 423 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 EGLN1Q9GZT9 426 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 PDE11AQ9HCR9 933 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 SLC22A11Q9NSA0 550 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 TAGLN3Q9UI15 199 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 SLC25A13Q9UJS0 675 aa3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 C19orf53Q9UNZ5 99 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-206ENST00000581631 RCE1Q9Y256 329 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms