RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TMEM248Q9NWD8 314 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 ADAM22Q9P0K1 906 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 WASF2Q9Y6W5 498 aa21.35■■□□□ 1.01
CCDC42-203ENST00000581598 FAM208BQ5VWN6 2430 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 RHOQP17081 205 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 HDAC4P56524 1084 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 SMAD1Q15797 465 aaKnown RBP21.34■■□□□ 1.01
CCDC42-203ENST00000581598 RAB6CQ53S08 254 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 SFMBT2Q5VUG0 894 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 ERN2Q76MJ5 926 aaKnown RBP21.34■■□□□ 1.01
CCDC42-203ENST00000581598 PROSER1Q86XN7 944 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 GATAD2AQ86YP4 633 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 ISG20Q96AZ6 181 aaKnown RBP21.34■■□□□ 1.01
CCDC42-203ENST00000581598 PCMTD1Q96MG8 357 aaPredicted RBP21.34■■□□□ 1.01
CCDC42-203ENST00000581598 RAB6CQ9H0N0 254 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 NEU3Q9UQ49 428 aa21.34■■□□□ 1.01
CCDC42-203ENST00000581598 GOLGA4Q13439 2230 aaKnown RBP21.33■■□□□ 1.01
CCDC42-203ENST00000581598 TRPM6Q9BX84 2022 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 SIGLEC16A6NMB1 481 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 CD160O95971 181 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 CDK4P11802 303 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 CDC25BP30305 580 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 RFC1P35251 1148 aaPredicted RBP21.33■■□□□ 1.01
CCDC42-203ENST00000581598 GEMIN4P57678 1058 aaKnown RBP21.33■■□□□ 1.01
CCDC42-203ENST00000581598 ZNF284Q2VY69 593 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 CARD16Q5EG05 197 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 ARSIQ5FYB1 569 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 MON1BQ7L1V2 547 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 KANSL1Q7Z3B3 1105 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 PHLDB2Q86SQ0 1253 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 HORMAD1Q86X24 394 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 DRC7Q8IY82 874 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 FAM172AQ8WUF8 416 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 HEPHQ9BQS7 1158 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 SELENOOQ9BVL4 669 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 MAGEH1Q9H213 219 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 TNKS2Q9H2K2 1166 aa21.33■■□□□ 1.01
CCDC42-203ENST00000581598 CACNA1GO43497 2377 aa21.33■■□□□ 1
CCDC42-203ENST00000581598 PKD1L2Q7Z442 2459 aa21.33■■□□□ 1
CCDC42-203ENST00000581598 KNTC1P50748 2209 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 A0A1W2PQU0 124 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 TCRBV5S1A1TA0A578 114 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 RNF103O00237 685 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 LEFTY1O75610 366 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 LRIG2O94898 1065 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 GJB6O95452 261 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 LDOC1O95751 146 aaPredicted RBP21.32■■□□□ 1
CCDC42-203ENST00000581598 C1SP09871 688 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 GPD1P21695 349 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 ITGB7P26010 798 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 C1QBPQ07021 282 aaKnown RBP21.32■■□□□ 1
CCDC42-203ENST00000581598 WDR59Q6PJI9 974 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 VSTM4Q8IW00 320 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 FAM174AQ8TBP5 190 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 GRIN3AQ8TCU5 1115 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 ARHGEF2Q92974 986 aaKnown RBP21.32■■□□□ 1
CCDC42-203ENST00000581598 TBC1D31Q96DN5 1066 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 KLHDC7BQ96G42 594 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 AGPAT1Q99943 283 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 NDFIP2Q9NV92 336 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 DKK4Q9UBT3 224 aa21.32■■□□□ 1
CCDC42-203ENST00000581598 GOLGA8CPA6NN73 597 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 FAM72CH0Y354 149 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 TAF4O00268 1085 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 ENC1O14682 589 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 PLEKP08567 350 aaPredicted RBP21.31■■□□□ 1
CCDC42-203ENST00000581598 CCDC172P0C7W6 258 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 L1CAMP32004 1257 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 ACVRL1P37023 503 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 NEK3P51956 506 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 FAM72AQ5TYM5 149 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 FAM72DQ6L9T8 149 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 RWDD4Q6NW29 188 aaKnown RBP21.31■■□□□ 1
CCDC42-203ENST00000581598 ZSCAN30Q86W11 494 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 FAM72BQ86X60 149 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 CCDC185Q8N715 623 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 LRIG1Q96JA1 1093 aa21.31■■□□□ 1
CCDC42-203ENST00000581598 CNDP2Q96KP4 475 aaKnown RBP21.31■■□□□ 1
CCDC42-203ENST00000581598 CCDC86Q9H6F5 360 aaKnown RBP21.31■■□□□ 1
CCDC42-203ENST00000581598 FCF1Q9Y324 198 aaKnown RBP21.31■■□□□ 1
CCDC42-203ENST00000581598 AP1G1O43747 822 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 FERP16591 822 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 HNRNPA2B1P22626 353 aaKnown RBP21.3■■□□□ 1
CCDC42-203ENST00000581598 AKT2P31751 481 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 CCNHP51946 323 aaPredicted RBP21.3■■□□□ 1
CCDC42-203ENST00000581598 ZNF143P52747 638 aaPredicted RBP21.3■■□□□ 1
CCDC42-203ENST00000581598 AIF1P55008 147 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 BNIP3Q12983 259 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 TMEM259Q4ZIN3 620 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 SLFN11Q7Z7L1 901 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 TSC1Q92574 1164 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 MYO6Q9UM54 1294 aa21.3■■□□□ 1
CCDC42-203ENST00000581598 ZFR2Q9UPR6 939 aaKnown RBP21.3■■□□□ 1
CCDC42-203ENST00000581598 ACACAQ13085 2346 aa21.29■■□□□ 1
CCDC42-203ENST00000581598 SLC31A1O15431 190 aa21.29■■□□□ 1
CCDC42-203ENST00000581598 RAMP2O60895 175 aa21.29■■□□□ 1
CCDC42-203ENST00000581598 GSRP00390 522 aa21.29■■□□□ 1
CCDC42-203ENST00000581598 ADRB3P13945 408 aa21.29■■□□□ 1
CCDC42-203ENST00000581598 CAMK2BQ13554 666 aa21.29■■□□□ 1
CCDC42-203ENST00000581598 PPP1R15BQ5SWA1 713 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms