RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MIIPQ5JXC2 388 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 FAM102AQ5T9C2 384 aaPredicted RBP10.82□□□□□ -0.68
RFFL-209ENST00000581265 BROXQ5VW32 411 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 CDCP2Q5VXM1 449 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 SEL1L3Q68CR1 1132 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 C22orf39Q6P5X5 142 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 Q6ZSR6 202 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 TFAP2DQ7Z6R9 452 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 XYLT1Q86Y38 959 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 FAM114A1Q8IWE2 563 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 SLC22A18ASQ8N1D0 253 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 OR7D4Q8NG98 312 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 GRIN3AQ8TCU5 1115 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 PPP1R16AQ96I34 528 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 FEM1CQ96JP0 617 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 BMFQ96LC9 184 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 MYOCQ99972 504 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 SPON2Q9BUD6 331 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 SLC17A9Q9BYT1 436 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 PDCL3Q9H2J4 239 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 TNKS2Q9H2K2 1166 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 GPR27Q9NS67 375 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 PPARGC1AQ9UBK2 798 aaKnown RBP10.82□□□□□ -0.68
RFFL-209ENST00000581265 DACH1Q9UI36 760 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 BPTFQ12830 3046 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 SCAMP1O15126 338 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 AP1G1O43747 822 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 OPA1O60313 960 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 LSM8O95777 96 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 PAK4O96013 591 aaPredicted RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 GP1BAP07359 652 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 ITGB7P26010 798 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 L1CAMP32004 1257 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 SERPINH1P50454 418 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 NEK3P51956 506 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 HNRNPKP61978 463 aaKnown RBP eCLIP10.81□□□□□ -0.681e-7■■□□□ 14.5
RFFL-209ENST00000581265 RPS21P63220 83 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 TBC1D25Q3MII6 688 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 CARD16Q5EG05 197 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 KLHDC7AQ5VTJ3 777 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 KIAA1161Q6NSJ0 714 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 TRNP1Q6NT89 227 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 GCNT7Q6ZNI0 430 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 ZSCAN30Q86W11 494 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 PCDH20Q8N6Y1 951 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 ISG20Q96AZ6 181 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 WBP1Q96G27 269 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 TUBGCP2Q9BSJ2 902 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 DUSP23Q9BVJ7 150 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 NAA15Q9BXJ9 866 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 CALN1Q9BXU9 219 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 ZYG11BQ9C0D3 744 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 RETREG1Q9H6L5 497 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 USP29Q9HBJ7 922 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 FZD3Q9NPG1 666 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 NLGN3Q9NZ94 848 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 FADS3Q9Y5Q0 445 aa10.81□□□□□ -0.68
RFFL-209ENST00000581265 TDRD6O60522 2096 aaKnown RBP10.81□□□□□ -0.68
RFFL-209ENST00000581265 LY6G6EA0A0G2JKS1 128 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 SPTY2D1-AS1A0A0U1RR47 76 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 POM121BA6NF01 834 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 A6NNZ2 444 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 K7ESM1 405 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 FFAR2O15552 330 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 TSPAN6O43657 245 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 CD160O95971 181 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 CSF2P04141 144 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 ALPPL2P10696 532 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 C6P13671 934 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 ADRB3P13945 408 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 UCHL3P15374 230 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 ERCC5P28715 1186 aaPredicted RBP10.8□□□□□ -0.68
RFFL-209ENST00000581265 DUSP3P51452 185 aaPredicted RBP10.8□□□□□ -0.68
RFFL-209ENST00000581265 ARF5P84085 180 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 NRG1Q02297 640 aaPredicted RBP10.8□□□□□ -0.68
RFFL-209ENST00000581265 GNA12Q03113 381 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 TLE3Q04726 772 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 RAPGEF1Q13905 1077 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 FGL2Q14314 439 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 FZD2Q14332 565 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 C2CD6Q53TS8 623 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 KDM7AQ6ZMT4 941 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 PRICKLE2Q7Z3G6 844 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 TMC6Q7Z403 805 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 NOP9Q86U38 636 aaKnown RBP10.8□□□□□ -0.68
RFFL-209ENST00000581265 FAM131BQ86XD5 332 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 LSMEM2Q8N112 164 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 ASB12Q8WXK4 309 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 APOLD1Q96LR9 279 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 LENG8Q96PV6 779 aaPredicted RBP10.8□□□□□ -0.68
RFFL-209ENST00000581265 LGMNQ99538 433 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 KLF6Q99612 283 aaPredicted RBP10.8□□□□□ -0.68
RFFL-209ENST00000581265 C1QTNF2Q9BXJ5 285 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 STK33Q9BYT3 514 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 ATP13A1Q9HD20 1204 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 IGSF5Q9NSI5 407 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms