RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	SYBU	Q9NX95	663 aa		10.08	□□□□□ -0.8
TRIM16-222	ENST00000581224	MID2	Q9UJV3	735 aa		10.08	□□□□□ -0.8
TRIM16-222	ENST00000581224	RIMKLB	Q9ULI2	386 aa		10.08	□□□□□ -0.8
TRIM16-222	ENST00000581224	TBC1D30	Q9Y2I9	924 aa		10.08	□□□□□ -0.8
TRIM16-222	ENST00000581224	PLXNA4	Q9HCM2	1894 aa		10.08	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ERICH4	A6NGS2	130 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	TRIM49D1	C9J1S8	452 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	BIRC5	O15392	142 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	TGM5	O43548	720 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	XYLB	O75191	536 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ASMTL	O95671	621 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	CYBB	P04839	570 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	MPO	P05164	745 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	FGF1	P05230	155 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	HLA-DQB2	P05538	268 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	RHOC	P08134	193 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	POU2F2	P09086	479 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	HOXB8	P17481	243 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PTPN2	P17706	415 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ALDH3A1	P30838	453 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	CRHR1	P34998	444 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ADRA1A	P35348	466 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	GRIA1	P42261	906 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	SERPINH1	P50454	418 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	KCNQ1	P51787	676 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	SMAD3	P84022	425 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	SLC20A2	Q08357	652 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	NIPAL4	Q0D2K0	466 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PDK4	Q16654	411 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	MPPE1	Q53F39	396 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ALF	Q53S48	1182 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	INO80D	Q53TQ3	878 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	FAM133B	Q5BKY9	247 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PPM1L	Q5SGD2	360 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	UBAP2	Q5T6F2	1119 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZNF697	Q5TEC3	545 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	IL31	Q6EBC2	164 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ALG1L	Q6GMV1	187 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	NADSYN1	Q6IA69	706 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	KIAA0408	Q6ZU52	694 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	HTR3D	Q70Z44	454 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	RASSF3	Q86WH2	238 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	TP53INP2	Q8IXH6	220 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	GBP7	Q8N8V2	638 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	IPMK	Q8NFU5	416 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	MZB1	Q8WU39	189 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	LRRN4	Q8WUT4	740 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZNF669	Q96BR6	464 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PABPC5	Q96DU9	382 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	TMA16	Q96EY4	203 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	OXNAD1	Q96HP4	312 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	FEM1C	Q96JP0	617 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	TSNARE1	Q96NA8	513 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	KLHL5	Q96PQ7	755 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PSKH2	Q96QS6	385 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	TGS1	Q96RS0	853 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	FAM167B	Q9BTA0	163 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	NT5M	Q9NPB1	228 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	UBA2	Q9UBT2	640 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZNF212	Q9UDV6	495 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PRKAG3	Q9UGI9	489 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	MSRA	Q9UJ68	235 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	AGO1	Q9UL18	857 aa	Known RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	SH3BP1	Q9Y3L3	701 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	CUL9	Q8IWT3	2517 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	PTPRS	Q13332	1948 aa		10.07	□□□□□ -0.8
TRIM16-222	ENST00000581224	C5orf67	F2Z3F1	127 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224		H0Y626	953 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZNF197	O14709	1029 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PFDN6	O15212	129 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ATP9B	O43861	1147 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	GLRA3	O75311	464 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PMPCB	O75439	489 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	CNTN5	O94779	1100 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PEX11B	O96011	259 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	C1QA	P02745	245 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	APOA4	P06727	396 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	C8A	P07357	584 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	NEFH	P12036	1026 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	DRD4	P21917	467 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	GABRR2	P28476	465 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	CTNNB1	P35222	781 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	RPA3	P35244	121 aa	Predicted RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PBX2	P40425	430 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	CCNF	P41002	786 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	MAPK8	P45983	427 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	SERPINB8	P50452	374 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	SEC24C	P53992	1094 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	WNT3A	P56704	352 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	THOC5	Q13769	683 aa	Known RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ARTN	Q5T4W7	220 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	FYB2	Q5VWT5	728 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ATG16L1	Q676U5	607 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	RETSAT	Q6NUM9	610 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PACS1	Q6VY07	963 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224		Q7L0L9	218 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms