RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 POMCP01189 267 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 LGALS2P05162 132 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 HLA-DPA1P20036 260 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PGS1Q32NB8 556 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FKBP1CQ5VVH2 108 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 C18orf25Q96B23 403 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FAXDC2Q96IV6 333 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PDGFCQ9NRA1 345 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FBXO5Q9UKT4 447 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 DHRS12A0PJE2 317 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 HGFP14210 728 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 TPSB2P20231 275 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 AKT1P31749 480 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 MATKP42679 507 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 MAXP61244 160 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 SQLEQ14534 574 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZNF460Q14592 562 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 TPSAB1Q15661 275 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 SLC9B1Q4ZJI4 515 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZDHHC13Q8IUH4 622 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 ITFG1Q8TB96 612 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 METTL6Q8TCB7 284 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 NXNL1Q96CM4 212 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 COMMD8Q9NX08 183 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZMYM5Q9UJ78 669 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 C2CD4BA6NLJ0 364 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 GPR25O00155 361 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 BTN3A1O00481 513 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 B4GALT4O60513 344 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FARP2O94887 1054 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 ADCYAP1R1P41586 468 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 GRM3Q14832 879 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 POLD3Q15054 466 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PITRM1Q5JRX3 1037 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PPM1LQ5SGD2 360 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 CACHD1Q5VU97 1274 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 LCLAT1Q6UWP7 414 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 LRTOMTQ8WZ04 291 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 CASP10Q92851 521 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 OTULINQ96BN8 352 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 DLDP09622 509 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 IVDP26440 423 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FMO4P31512 558 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 NR1D2Q14995 579 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZNF618Q5T7W0 954 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 TERB1Q8NA31 727 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 FAM120BQ96EK7 910 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 MIPEPQ99797 713 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PLGRKTQ9HBL7 147 aa13.75□□□□□ -0.21
TRAPPC8-207ENST00000580104 PMM2O15305 246 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 SLC2A3P11169 496 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 NPR3P17342 541 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 ARL2P36404 184 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 CCT8P50990 548 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 SLC18A1P54219 525 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 RAD23AP54725 363 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 KLF1Q13351 362 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 SNAPC2Q13487 334 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 LPIN1Q14693 890 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 GNASQ5JWF2 1037 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 PRMT9Q6P2P2 845 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 VAT1Q99536 393 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 LPIN3Q9BQK8 851 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 C1orf50Q9BV19 199 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 PRKD2Q9BZL6 878 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 MTF2Q9Y483 593 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 RECQLP46063 649 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 DEFA1P59665 94 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 DEFA3P59666 94 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 OTOP3Q7RTS5 596 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 ANKRD13AQ8IZ07 590 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 TCF12Q99081 682 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZNF556Q9HAH1 456 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 STX16-NPEPL1H3BU86 382 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 ZBTB24O43167 697 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 LINC00032P0C843 101 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 LBPP18428 481 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 LHX1P48742 406 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 RENBPP51606 427 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 PSMD7P51665 324 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 FRMD7Q6ZUT3 714 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 SPPL2CQ8IUH8 684 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 TMEM192Q8IY95 271 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 BPIFB6Q8NFQ5 453 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 MRPL57Q9BQC6 102 aaKnown RBP13.74□□□□□ -0.21
TRAPPC8-207ENST00000580104 C6orf62Q9GZU0 229 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms