RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 PCDHGA1Q9Y5H4 931 aa11.77□□□□□ -0.53
SSH2-208ENST00000579040 WASF2Q9Y6W5 498 aa11.77□□□□□ -0.53
SSH2-208ENST00000579040 A0A1W2PQU0 124 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 TCRBV5S1A1TA0A578 114 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 FAM72CH0Y354 149 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 ENC1O14682 589 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 AP1G1O43747 822 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 RAMP2O60895 175 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 GJB6O95452 261 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 LDOC1O95751 146 aaPredicted RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 C1SP09871 688 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 DESP17661 470 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 HNRNPA2B1P22626 353 aaKnown RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 AKT2P31751 481 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 L1CAMP32004 1257 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 ACVRL1P37023 503 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 ZNF143P52747 638 aaPredicted RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 AIF1P55008 147 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 ZNF284Q2VY69 593 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 FAM72AQ5TYM5 149 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 SFMBT2Q5VUG0 894 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 FAM72DQ6L9T8 149 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 KIAA1161Q6NSJ0 714 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 DNAJC24Q6P3W2 148 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 KANSL1Q7Z3B3 1105 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 SLFN11Q7Z7L1 901 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 FAM72BQ86X60 149 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 CCDC185Q8N715 623 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 ARHGEF2Q92974 986 aaKnown RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 KLHDC7BQ96G42 594 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 LRIG1Q96JA1 1093 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 CNDP2Q96KP4 475 aaKnown RBP11.76□□□□□ -0.53
SSH2-208ENST00000579040 BPIFA3Q9BQP9 254 aa11.76□□□□□ -0.53
SSH2-208ENST00000579040 SLC31A1O15431 190 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 CCP110O43303 1012 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 PCDH8O95206 1070 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 CD160O95971 181 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 GSRP00390 522 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 ADRB3P13945 408 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 PRLRP16471 622 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 DNA2P51530 1060 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 RPS21P63220 83 aaKnown RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 POLD3Q15054 466 aaPredicted RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 EFHC2Q5JST6 749 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 ACAD10Q6JQN1 1059 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 FBXL19Q6PCT2 694 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 PROSER1Q86XN7 944 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 EID2Q8N6I1 236 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 RTL3Q8N8U3 475 aaKnown RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 CASKIN2Q8WXE0 1202 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 RAB7BQ96AH8 199 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 CNPY3Q9BT09 278 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 CCDC86Q9H6F5 360 aaKnown RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 NDFIP2Q9NV92 336 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
SSH2-208ENST00000579040 ZFR2Q9UPR6 939 aaKnown RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
SSH2-208ENST00000579040 ANKRD36A6QL64 1941 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 ZZEF1O43149 2961 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 URB1O60287 2271 aaKnown RBP11.74□□□□□ -0.53
SSH2-208ENST00000579040 SMTNL1A8MU46 457 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 RNF103O00237 685 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 KDELR3O43731 214 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 RFPL3O75679 317 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 POP4O95707 220 aaKnown RBP11.74□□□□□ -0.53
SSH2-208ENST00000579040 THEGLP0DJG4 465 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 EPHB2P29323 1055 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 HTR7P34969 479 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 YBEYP58557 167 aaPredicted RBP11.74□□□□□ -0.53
SSH2-208ENST00000579040 SNRPD1P62314 119 aaKnown RBP11.74□□□□□ -0.53
SSH2-208ENST00000579040 BNIP3Q12983 259 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 ILKQ13418 452 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 ANO6Q4KMQ2 910 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 DCUN1D2Q6PH85 259 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 PARS2Q7L3T8 475 aaKnown RBP11.74□□□□□ -0.53
SSH2-208ENST00000579040 ABI3BPQ7Z7G0 1075 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 TMPRSS12Q86WS5 348 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 DCP2Q8IU60 420 aaKnown RBP11.74□□□□□ -0.53
SSH2-208ENST00000579040 MCOLN2Q8IZK6 566 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 OR2AP1Q8NGE2 309 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 TSC1Q92574 1164 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 ARHGEF26Q96DR7 871 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 IFT43Q96FT9 208 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 FEM1CQ96JP0 617 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 MCEEQ96PE7 176 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 EPAS1Q99814 870 aa11.74□□□□□ -0.53
SSH2-208ENST00000579040 SYT11Q9BT88 431 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms