RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TRMT11Q7Z4G4 463 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 BMP8AQ7Z5Y6 402 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 METTL3Q86U44 580 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 SYNPOQ8N3V7 929 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 RYBPQ8N488 228 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 C12orf50Q8NA57 414 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 TSEN2Q8NCE0 465 aaKnown RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 OR6K2Q8NGY2 324 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 CCDC26Q8TAB7 109 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 CASKIN2Q8WXE0 1202 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 MAML1Q92585 1016 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 FATE1Q969F0 183 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 MYO19Q96H55 970 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 DLGAP2Q9P1A6 1054 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
IFT20-207ENST00000578547 LHX3Q9UBR4 397 aa12.34□□□□□ -0.43
IFT20-207ENST00000578547 EDDM13A0A1B0GTR0 161 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 CFAP69A5D8W1 941 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 NPC1O15118 1278 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 MUSKO15146 869 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 ATP9BO43861 1147 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 ITGAVP06756 1048 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 NTSR1P30989 418 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 CHRNA3P32297 505 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 RECQLP46063 649 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 RGRP47804 291 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 MAXP61244 160 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 WASHC5Q12768 1159 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 CYP1B1Q16678 543 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 INO80DQ53TQ3 878 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 PRUNE1Q86TP1 453 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 PGBD5Q8N414 524 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 CCDC89Q8N998 374 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 SPATA4Q8NEY3 305 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 CCDC110Q8TBZ0 833 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 FRS2Q8WU20 508 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 GDAP1L1Q96MZ0 367 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 PSKH2Q96QS6 385 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 KRT12Q99456 494 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 CEP44Q9C0F1 390 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 TMEM245Q9H330 911 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 USP29Q9HBJ7 922 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 HAUS2Q9NVX0 235 aa12.33□□□□□ -0.44
IFT20-207ENST00000578547 POLR3BQ9NW08 1133 aaPredicted RBP12.33□□□□□ -0.44
IFT20-207ENST00000578547 CXorf51AA0A1B0GTR3 108 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 CCDC188H7C350 402 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 SYNCRIPO60506 623 aaKnown RBP12.32□□□□□ -0.44
IFT20-207ENST00000578547 GJB3O75712 270 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 ZNF189O75820 626 aaPredicted RBP12.32□□□□□ -0.44
IFT20-207ENST00000578547 IGSF6O95976 241 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 HOXB2P14652 356 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 RPS9P46781 194 aaKnown RBP12.32□□□□□ -0.44
IFT20-207ENST00000578547 FNTAP49354 379 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 CLCN5P51795 746 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 STARD3Q14849 445 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 TRIP13Q15645 432 aaPredicted RBP12.32□□□□□ -0.44
IFT20-207ENST00000578547 HNRNPA1L2Q32P51 320 aaKnown RBP12.32□□□□□ -0.44
IFT20-207ENST00000578547 ARHGEF18Q6ZSZ5 1173 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 PID1Q7Z2X4 250 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 CACUL1Q86Y37 369 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 ZNF567Q8N184 647 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 TEX26Q8N6G2 289 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 TMEM105Q8N8V8 129 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 KDM1BQ8NB78 822 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 OR2AP1Q8NGE2 309 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 GRIN3AQ8TCU5 1115 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 POLR1EQ9GZS1 481 aaKnown RBP12.32□□□□□ -0.44
IFT20-207ENST00000578547 CHRDQ9H2X0 955 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 RSPH14Q9UHP6 348 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
IFT20-207ENST00000578547 MUC3AQ02505 3323 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 CTAGE15A4D2H0 777 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 CHURC1-FNTBB4DL54 471 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 DLL1O00548 723 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 INSIG1O15503 277 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 ZBTB24O43167 697 aaPredicted RBP12.31□□□□□ -0.44
IFT20-207ENST00000578547 GPR37L1O60883 481 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 ADAM23O75077 832 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 SIN3BO75182 1162 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 ZNF821O75541 412 aaPredicted RBP12.31□□□□□ -0.44
IFT20-207ENST00000578547 ECEL1O95672 775 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 GSRP00390 522 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 ZSCAN5DPP0CG00 497 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 CTAGE8P0CG41 777 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 ETS1P14921 441 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 NFKB1P19838 968 aa12.31□□□□□ -0.44
IFT20-207ENST00000578547 GKP32189 559 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms