RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ETFBKMTQ8IXQ9 262 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 USP33Q8TEY7 942 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 PRCCQ92733 491 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-202ENST00000578430 FGF14Q92915 247 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-202ENST00000578430 KXD1Q9BQD3 176 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 CINPQ9BW66 212 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-202ENST00000578430 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-202ENST00000578430 CEP41Q9BYV8 373 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 PLA2G2FQ9BZM2 168 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 POLR1EQ9GZS1 481 aaKnown RBP13.65□□□□□ -0.22
SRSF1-202ENST00000578430 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 NT5MQ9NPB1 228 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 HPS4Q9NQG7 708 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 VPS45Q9NRW7 570 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 CLEC4EQ9ULY5 219 aa13.65□□□□□ -0.22
SRSF1-202ENST00000578430 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 TIMM44O43615 452 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 SUN1O94901 812 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 AP2A1O95782 977 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 ASLP04424 464 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 CISD3P0C7P0 127 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 MLNP12872 115 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 GDI1P31150 447 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 ARL4CP56559 192 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 TFF2Q03403 129 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 SMAD2Q15796 467 aaKnown RBP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 ITPRIPL2Q3MIP1 535 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 SPDYCQ5MJ68 293 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 RELL1Q8IUW5 271 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 APCDD1Q8J025 514 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 TTC17Q96AE7 1141 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 IMP4Q96G21 291 aaKnown RBP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 MGME1Q9BQP7 344 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 XAB2Q9HCS7 855 aaKnown RBP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 DNAJC17Q9NVM6 304 aaKnown RBP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 DEC1Q9P2X7 70 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 SLC25A13Q9UJS0 675 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 INTS6Q9UL03 887 aaKnown RBP13.64□□□□□ -0.23
SRSF1-202ENST00000578430 NUMBLQ9Y6R0 609 aa13.64□□□□□ -0.23
SRSF1-202ENST00000578430 SNAP91O60641 907 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 TULP3O75386 442 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 TMCC1O94876 653 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 POLR2EP19388 210 aaKnown RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 GLDCP23378 1020 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 SERPINH1P50454 418 aaKnown RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 MPP3Q13368 585 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 GRM2Q14416 872 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 EIF4HQ15056 248 aaKnown RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 E2F5Q15329 346 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 CYTH1Q15438 398 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 HIF1AQ16665 826 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 FUT11Q495W5 492 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 BEND6Q5SZJ8 279 aaPredicted RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 FAXCQ5TGI0 409 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 KCTD11Q693B1 232 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 GRAMD4Q6IC98 578 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 NAPEPLDQ6IQ20 393 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 CENPUQ71F23 418 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 LINC00523Q86TU6 105 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 PDIK1LQ8N165 341 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 MREGQ8N565 214 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 ISG20Q96AZ6 181 aaKnown RBP13.63□□□□□ -0.23
SRSF1-202ENST00000578430 CEP44Q9C0F1 390 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 BRD9Q9H8M2 597 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 FAM153AQ9UHL3 310 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 HS3ST2Q9Y278 367 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 TTLL3Q9Y4R7 772 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 BRWD1Q9NSI6 2320 aa13.63□□□□□ -0.23
SRSF1-202ENST00000578430 C2CD4DB7Z1M9 353 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 ARNTLO00327 626 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 TMEM63AO94886 807 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 CD160O95971 181 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 SRPRAP08240 638 aaKnown RBP13.62□□□□□ -0.23
SRSF1-202ENST00000578430 BMP1P13497 986 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 MAPK8P45983 427 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 CSNK1DP48730 415 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 ECT2LQ008S8 904 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 ITKQ08881 620 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 KCTD19Q17RG1 926 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-202ENST00000578430 GAB4Q2WGN9 574 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
SRSF1-202ENST00000578430 ARMC3Q5W041 872 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 MBLAC2Q68D91 279 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 NUDT18Q6ZVK8 323 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 ADIPOR2Q86V24 386 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 SUGP1Q8IWZ8 645 aaKnown RBP13.62□□□□□ -0.23
SRSF1-202ENST00000578430 PLPP6Q8IY26 295 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 GSPT2Q8IYD1 628 aaKnown RBP13.62□□□□□ -0.23
SRSF1-202ENST00000578430 PGBD5Q8N414 524 aa13.62□□□□□ -0.23
SRSF1-202ENST00000578430 TAB3Q8N5C8 712 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms