RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 LEMD2Q8NC56 503 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 OR52K2Q8NGK3 314 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 SEC14L1Q92503 715 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 AZIN2Q96A70 460 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 SNF8Q96H20 258 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 PWWP2AQ96N64 755 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 DNAJC17Q9NVM6 304 aaKnown RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 ZNF212Q9UDV6 495 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 FEZ2Q9UHY8 353 aaPredicted RBP10.28□□□□□ -0.76
CRLF3-202ENST00000577725 KLK13Q9UKR3 277 aa10.28□□□□□ -0.76
CRLF3-202ENST00000577725 NUP210Q8TEM1 1887 aaPredicted RBP10.27□□□□□ -0.76
CRLF3-202ENST00000577725 TCRBV7S3A2A0A539 114 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 CFAP69A5D8W1 941 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 RNF103O00237 685 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 DNALI1O14645 258 aaPredicted RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 PAPLNO95428 1278 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 PFKLP17858 780 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 MX2P20592 715 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 FSHRP23945 695 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 PTPN3P26045 913 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 CHKAP35790 457 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 VIPR2P41587 438 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 SATB1Q01826 763 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 GAD2Q05329 585 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 PPIDQ08752 370 aaKnown RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 WASHC5Q12768 1159 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ZBTB17Q13105 803 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 USP4Q13107 963 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 CUL1Q13616 776 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 C5orf22Q49AR2 442 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ADGRF1Q5T601 910 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ANKRD22Q5VYY1 191 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 TPGS1Q6ZTW0 290 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 BZW1Q7L1Q6 419 aaKnown RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 NPAS3Q8IXF0 933 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 CCDC13Q8IYE1 715 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 CARNMT1Q8N4J0 409 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 OR7D4Q8NG98 312 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ZSCAN18Q8TBC5 510 aaPredicted RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 FBXO25Q8TCJ0 367 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 WFDC5Q8TCV5 224 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 AENQ8WTP8 325 aaKnown RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 HNRNPLLQ8WVV9 542 aaKnown RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 HTR3CQ8WXA8 447 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 RSPRY1Q96DX4 576 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 LRIG1Q96JA1 1093 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 DDX50Q9BQ39 737 aaKnown RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 EDEM2Q9BV94 578 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 VPS45Q9NRW7 570 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ZDHHC18Q9NUE0 388 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ARGLU1Q9NWB6 273 aaPredicted RBP10.27□□□□□ -0.77
CRLF3-202ENST00000577725 ANAPC5Q9UJX4 755 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 PCDHGA5Q9Y5G8 931 aa10.27□□□□□ -0.77
CRLF3-202ENST00000577725 DOCK8Q8NF50 2099 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 A0A0A0MRY4 1105 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 A0A0D9SEW6 157 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 CCDC151A5D8V7 595 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 C4orf47A7E2U8 309 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 GOLGA8MH3BSY2 632 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 TK2O00142 265 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 GFRA2O00451 464 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 TP73O15350 636 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 RAMP2O60895 175 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ERLIN1O75477 346 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 C1QL1O75973 258 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 METTL18O95568 372 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 LATS1O95835 1130 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 JCHAINP01591 159 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 RHOCP08134 193 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 MCM3P25205 808 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 OR1E1P30953 314 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 MAPKAPK2P49137 400 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 CDH4P55283 916 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 BASP1P80723 227 aaKnown RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 CALCOCO2Q13137 446 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 MTA1Q13330 715 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF77Q15935 545 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ANKRD20A2Q5SQ80 823 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 BEND6Q5SZJ8 279 aaPredicted RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 RNASEH2BQ5TBB1 312 aaKnown RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ANKRD20A1Q5TYW2 823 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ANKRD20A3Q5VUR7 823 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 HTR3DQ70Z44 454 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ARID3BQ8IVW6 561 aaPredicted RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 FAM217AQ8IXS0 508 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF567Q8N184 647 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 UMODL1-AS1Q8N2C9 162 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 LZTR1Q8N653 840 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 HJURPQ8NCD3 748 aaPredicted RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ART4Q93070 314 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 LRRC45Q96CN5 670 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 HDAC11Q96DB2 347 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 RTP4Q96DX8 246 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 SPATA13Q96N96 652 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 LRRC3BQ96PB8 259 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 SPON2Q9BUD6 331 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms