RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CASP2P42575 452 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 ABCG1P45844 678 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 ENTPD1P49961 510 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 CLNS1AP54105 237 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 TRAF2Q12933 501 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 MTX1Q13505 466 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SIM2Q14190 667 aaPredicted RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 RBMS2Q15434 407 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 RPE65Q16518 533 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 HIST2H2ACQ16777 129 aaPredicted RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 SMTNL2Q2TAL5 461 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 AP5B1Q2VPB7 878 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SUPT20HL1Q3ZLR7 823 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 Q5PR19 223 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 ACAD10Q6JQN1 1059 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 HEPHL1Q6MZM0 1159 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 CPLX2Q6PUV4 134 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 PARM1Q6UWI2 310 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 TADA2BQ86TJ2 420 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SERPINA11Q86U17 422 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 PALB2Q86YC2 1186 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.7□□□□□ -1.98
COPS3-213ENST00000577210 NME8Q8N427 588 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SETD9Q8NE22 299 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SMG7Q92540 1137 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 IP6K1Q92551 441 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 VOPP1Q96AW1 172 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 RNF183Q96D59 192 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 ZNF419Q96HQ0 510 aaPredicted RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 TIGD1Q96MW7 591 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 C7orf26Q96N11 449 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 NEUROD6Q96NK8 337 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 EYA3Q99504 573 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 HERC2P3Q9BVR0 1158 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 ARHGAP39Q9C0H5 1083 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 PAIP1Q9H074 479 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 CATSPERBQ9H7T0 1116 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SEMA4BQ9NPR2 832 aaPredicted RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 SPATS2LQ9NUQ6 558 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 TMEM184CQ9NVA4 438 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 HIF1ANQ9NWT6 349 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 BABAM1Q9NWV8 329 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 TBC1D14Q9P2M4 693 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 IL36RNQ9UBH0 155 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 HSF4Q9ULV5 492 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 RAP2CQ9Y3L5 183 aa2.7□□□□□ -1.98
COPS3-213ENST00000577210 SRPRBQ9Y5M8 271 aaKnown RBP2.7□□□□□ -1.98
COPS3-213ENST00000577210 UTYO14607 1347 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 TTBK1Q5TCY1 1321 aaPredicted RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 IGLV5-39A0A0G2JS06 123 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 MYMKA6NI61 221 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 CGB1A6NKQ9 187 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SEC14L2O76054 403 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SLC2A4P14672 509 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 MYF6P23409 242 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 FMO4P31512 558 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ABCD1P33897 745 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 DPP6P42658 865 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 CENPAP49450 140 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 RGS19P49795 217 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ARSFP54793 590 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 GEMIN4P57678 1058 aaKnown RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 EFNB1P98172 346 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 GOLGA8DPQ0D2H9 430 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ST3GAL1Q11201 340 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 PTP4A2Q12974 167 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 HNRNPA0Q13151 305 aaKnown RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 TAF11Q15544 211 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 CCNG2Q16589 344 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 GSTA3Q16772 222 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 Q4G0T1 1027 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 COLEC12Q5KU26 742 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ENTPD8Q5MY95 495 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SH2D4BQ5SQS7 431 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 OTUD1Q5VV17 481 aaPredicted RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 SLC22A25Q6T423 547 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 B4GALNT4Q76KP1 1039 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 CHD1LQ86WJ1 897 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 FAM217AQ8IXS0 508 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 GABPB2Q8TAK5 448 aaPredicted RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 ADAMTS15Q8TE58 950 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 NTN5Q8WTR8 489 aaPredicted RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 TMEM174Q8WUU8 243 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SLC35F5Q8WV83 523 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 DDB2Q92466 427 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SMARCE1Q969G3 411 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SKA1Q96BD8 255 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 KIF1BPQ96EK5 621 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 CCDC34Q96HJ3 373 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 H2AFJQ9BTM1 129 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.69□□□□□ -1.98
COPS3-213ENST00000577210 SLC29A3Q9BZD2 475 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 B3GNT4Q9C0J1 378 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ZNF304Q9HCX3 659 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 MLXIPLQ9NP71 852 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SPAG4Q9NPE6 437 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 SMC4Q9NTJ3 1288 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 GGA3Q9NZ52 723 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 MSRB1Q9NZV6 116 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ZNF70Q9UC06 446 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms