RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SPACA3Q8IXA5 215 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 CNPY4Q8N129 248 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SIX6OS1Q8N1H7 587 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 PPM1KQ8N3J5 372 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 TAB3Q8N5C8 712 aaPredicted RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 LMO3Q8TAP4 145 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SPATA20Q8TB22 786 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SLC35F5Q8WV83 523 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 UCMAQ8WVF2 138 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 KCTD13Q8WZ19 329 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 DNASE2BQ8WZ79 361 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 PRCCQ92733 491 aaPredicted RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 TMA16Q96EY4 203 aaKnown RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 NT5C1BQ96P26 610 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 GSDMAQ96QA5 445 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
NUP88-212ENST00000576708 C6orf106Q9H6K1 298 aaPredicted RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 ACP6Q9NPH0 428 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 ABCB8Q9NUT2 735 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 EIF2B4Q9UI10 523 aaKnown RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.38
NUP88-212ENST00000576708 HBS1LQ9Y450 684 aaKnown RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 USP24Q9UPU5 2620 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 ASCC3Q8N3C0 2202 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 A0A1B0GTW7 788 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 A0A1B0GVT2 93 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 SCO2A0A1W2PP80 73 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 WASH4PA8MWX3 477 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 STK10O94804 968 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 IGLV3-27P01718 113 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 SETSIPP0DME0 302 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 ACADMP11310 421 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 PABPC1P11940 636 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 GNSP15586 552 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 TBXAS1P24557 533 aaPredicted RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 ACSL1P33121 698 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CD96P40200 585 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CCNFP41002 786 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CD97P48960 835 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CSNK1EP49674 416 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 TBX4P57082 545 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 YWHAEP62258 255 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 RPS14P62263 151 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 RPS24P62847 133 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 APBA1Q02410 837 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 LRRC63Q05C16 580 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 EIF4HQ15056 248 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 TRIP6Q15654 476 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 CNGA2Q16280 664 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 IFI16Q16666 785 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 FAM133BQ5BKY9 247 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 WDR45BQ5MNZ6 344 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 ADGRF1Q5T601 910 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 PIK3R6Q5UE93 754 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 MBLAC2Q68D91 279 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 TTI2Q6NXR4 508 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 MSANTD2Q6P1R3 559 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 LAYNQ6UX15 382 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 MMS22LQ6ZRQ5 1243 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 KIAA0907Q7Z7F0 614 aaPredicted RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 MARCH9Q86YJ5 346 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 NAXDQ8IW45 347 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CFAP52Q8N1V2 620 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 OR2T3Q8NH03 318 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 NELFBQ8WX92 580 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 SNX19Q92543 992 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CCDC34Q96HJ3 373 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 DHTKD1Q96HY7 919 aaPredicted RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 LMLNQ96KR4 655 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 FCRL2Q96LA5 508 aaPredicted RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 PRICKLE1Q96MT3 831 aaPredicted RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 NUP58Q9BVL2 599 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 SLC2A11Q9BYW1 496 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 LHX5Q9H2C1 402 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 TMEM245Q9H330 911 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 FAM124BQ9H5Z6 455 aaPredicted RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 PRSS16Q9NQE7 514 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CNGB3Q9NQW8 809 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 ABCC13Q9NSE7 274 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 OLA1Q9NTK5 396 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 PCMTD2Q9NV79 361 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 SUCOQ9UBS9 1254 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 SUSD2Q9UGT4 822 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CYTH4Q9UIA0 394 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 XPO7Q9UIA9 1087 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 GGA2Q9UJY4 613 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 STOML2Q9UJZ1 356 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 INTS6Q9UL03 887 aaKnown RBP6.45□□□□□ -1.38
NUP88-212ENST00000576708 KIAA1257Q9ULG3 409 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 CTNND2Q9UQB3 1225 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 NAALADL1Q9UQQ1 740 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 GON4LQ3T8J9 2241 aa6.45□□□□□ -1.38
NUP88-212ENST00000576708 AKAP13Q12802 2813 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 MUC22E2RYF6 1773 aaPredicted RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 SRRM3A6NNA2 597 aaPredicted RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 H3BS24 57 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 TAF4O00268 1085 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 PSMA7O14818 248 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms