RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 SKA1Q96BD8 255 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 GDAP1L1Q96MZ0 367 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 SP110Q9HB58 689 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 CAPN10Q9HC96 672 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 SPTLC3Q9NUV7 552 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 UVRAGQ9P2Y5 699 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 HECAQ9UBI9 543 aaPredicted RBP15.54■□□□□ 0.08
SMG6-220ENST00000576218 UBA2Q9UBT2 640 aaPredicted RBP15.54■□□□□ 0.08
SMG6-220ENST00000576218 LCMT1Q9UIC8 334 aa15.54■□□□□ 0.08
SMG6-220ENST00000576218 CXorf51AA0A1B0GTR3 108 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 TMCC1O94876 653 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 CTSLP07711 333 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 C7P10643 843 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 ERCC2P18074 760 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 DRD3P35462 400 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 NDST2P52849 883 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 GRIK2Q13002 908 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 SERINC3Q13530 473 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 SLC45A4Q5BKX6 768 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 ARTNQ5T4W7 220 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 FBXL19Q6PCT2 694 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 IL27RAQ6UWB1 636 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 PRPF39Q86UA1 669 aaKnown RBP15.53■□□□□ 0.08
SMG6-220ENST00000576218 NIPA2Q8N8Q9 360 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 OR6K2Q8NGY2 324 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 ISG20Q96AZ6 181 aaKnown RBP15.53■□□□□ 0.08
SMG6-220ENST00000576218 CHP1Q99653 195 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 PACSIN1Q9BY11 444 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 ZDHHC5Q9C0B5 715 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 RBSNQ9H1K0 784 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
SMG6-220ENST00000576218 NUMA1Q14980 2115 aa15.53■□□□□ 0.08
SMG6-220ENST00000576218 NEMP1O14524 444 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 PLRG1O43660 514 aaKnown RBP15.52■□□□□ 0.08
SMG6-220ENST00000576218 PCDH8O95206 1070 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 CER1O95813 267 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 GSRP00390 522 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 TMEM253P0C7T8 217 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 RARAP10276 462 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 MAT2AP31153 395 aaKnown RBP15.52■□□□□ 0.08
SMG6-220ENST00000576218 CSNK1EP49674 416 aaKnown RBP15.52■□□□□ 0.08
SMG6-220ENST00000576218 CCR5P51681 352 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 NEK3P51956 506 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 CDH6P55285 790 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 ODF2Q5BJF6 829 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 PPM1JQ5JR12 505 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 CFAP58Q5T655 872 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 TMCO3Q6UWJ1 677 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 ERN2Q76MJ5 926 aaKnown RBP15.52■□□□□ 0.08
SMG6-220ENST00000576218 OR2AP1Q8NGE2 309 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 SERAC1Q96JX3 654 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 KDM4CQ9H3R0 1056 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 NOL6Q9H6R4 1146 aaKnown RBP15.52■□□□□ 0.08
SMG6-220ENST00000576218 TM9SF3Q9HD45 589 aa15.52■□□□□ 0.08
SMG6-220ENST00000576218 CWC15Q9P013 229 aaKnown RBP15.52■□□□□ 0.08
SMG6-220ENST00000576218 A0A1B0GVT2 93 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 A0A1W2PPC4 97 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 IGHV4-34P06331 123 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 TCF4P15884 667 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 XPAP23025 273 aaPredicted RBP15.51■□□□□ 0.07
SMG6-220ENST00000576218 IL1R2P27930 398 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 SERPINB6P35237 376 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 PAPOLAP51003 745 aaKnown RBP15.51■□□□□ 0.07
SMG6-220ENST00000576218 ZNF75DP51815 510 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 PPP2CBP62714 309 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 PPP2CAP67775 309 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 DPYSL2Q16555 572 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 SETMARQ53H47 684 aaPredicted RBP15.51■□□□□ 0.07
SMG6-220ENST00000576218 ATXN7L2Q5T6C5 722 aaPredicted RBP15.51■□□□□ 0.07
SMG6-220ENST00000576218 AGBL4Q5VU57 503 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 LZTR1Q8N653 840 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 KCTD6Q8NC69 237 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 OR2I1PQ8NGU4 316 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 TEKT4Q8WW24 435 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 ARRDC3Q96B67 414 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 SLC6A18Q96N87 628 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 CINPQ9BW66 212 aaPredicted RBP15.51■□□□□ 0.07
SMG6-220ENST00000576218 CALN1Q9BXU9 219 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 SLC32A1Q9H598 525 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 PREBQ9HCU5 417 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
SMG6-220ENST00000576218 WASF2Q9Y6W5 498 aa15.51■□□□□ 0.07
SMG6-220ENST00000576218 PI4KAP42356 2102 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 CDX4O14627 284 aaPredicted RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 RNGTTO60942 597 aaKnown RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 PALMO75781 387 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 PROSCO94903 275 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 IPO7O95373 1038 aaKnown RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 POP4O95707 220 aaKnown RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 UGT2B4P06133 528 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 KRT7P08729 469 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 ITGB7P26010 798 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 GRIA4P48058 902 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 HCAR3P49019 387 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 NOVA1P51513 510 aaKnown RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 RACK1P63244 317 aaKnown RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 FOXK2Q01167 660 aa15.5■□□□□ 0.07
SMG6-220ENST00000576218 SLC25A11Q02978 314 aaKnown RBP15.5■□□□□ 0.07
SMG6-220ENST00000576218 TBX2Q13207 712 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms