RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SPOCD1Q6ZMY3 1216 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 DPY19L3Q6ZPD9 716 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 NT5DC3Q86UY8 548 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 RFX6Q8HWS3 928 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 RHOT1Q8IXI2 618 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 PGBD5Q8N414 524 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 DCLK2Q8N568 766 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 TSEN2Q8NCE0 465 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 MNS1Q8NEH6 495 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 OR2T3Q8NH03 318 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 COG1Q8WTW3 980 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ARRDC3Q96B67 414 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 RNF157Q96PX1 679 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 OSBPL9Q96SU4 736 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF670Q9BS34 389 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 IER2Q9BTL4 223 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 C2orf49Q9BVC5 232 aaPredicted RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 HEMGNQ9BXL5 484 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 RSPH9Q9H1X1 276 aaPredicted RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 MAGEH1Q9H213 219 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ZDHHC6Q9H6R6 413 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 PRDM16Q9HAZ2 1276 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 FSCN3Q9NQT6 498 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ZSCAN32Q9NX65 697 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 DTLQ9NZJ0 730 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 RNF14Q9UBS8 474 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 GGT7Q9UJ14 662 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 SMG5Q9UPR3 1016 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ITM2BQ9Y287 266 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 WASF2Q9Y6W5 498 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 DCHS1Q96JQ0 3298 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 BPTFQ12830 3046 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 GVINP1Q7Z2Y8 2422 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 hCG_1818297A0A087WSY0 165 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 EDDM13A0A1B0GTR0 161 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CTAGE15A4D2H0 777 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PRR23AA6NEV1 266 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SPINT1O43278 529 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PSTPIP1O43586 416 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 MAFKO60675 156 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PRAMEF11O60813 436 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 IL1BP01584 269 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 KRT7P08729 469 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CTAGE8P0CG41 777 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PYGMP11217 842 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ITIH2P19823 946 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ACSL1P33121 698 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 DRD3P35462 400 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 P2RY2P41231 377 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 NBL1P41271 181 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PTGER3P43115 390 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PEX5P50542 639 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 TPMTP51580 245 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CCNHP51946 323 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SLC10A7Q0GE19 358 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ZBTB17Q13105 803 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PAFAH1B3Q15102 231 aaKnown RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CST6Q15828 149 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF528Q3MIS6 628 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PARP15Q460N3 678 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 HSF5Q4G112 596 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 TCEAL6Q6IPX3 200 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SDE2Q6IQ49 451 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 LAYNQ6UX15 382 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF783Q6ZMS7 281 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 MAMSTRQ6ZN01 415 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CTAGE6Q86UF2 777 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 PSTKQ8IV42 348 aaKnown RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SLC41A1Q8IVJ1 513 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CCDC50Q8IVM0 306 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 CTAGE4Q8IX94 777 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 TMEFF1Q8IYR6 380 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 KATNAL2Q8IYT4 538 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ATPAF2Q8N5M1 289 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 ZNF557Q8N988 423 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SUMF1Q8NBK3 374 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 KCNV2Q8TDN2 545 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 UBXN4Q92575 508 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 TCEAL3Q969E4 200 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SIPA1Q96FS4 1042 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 HES6Q96HZ4 224 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SMIM14Q96QK8 99 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 LGMNQ99538 433 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 BRD8Q9H0E9 1235 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 DUSP15Q9H1R2 295 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 C6orf106Q9H6K1 298 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 SP110Q9HB58 689 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 USP36Q9P275 1121 aaKnown RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 EVLQ9UI08 416 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 IPO11Q9UI26 975 aaKnown RBP8.04□□□□□ -1.12
CCDC40-215ENST00000576033 RAB21Q9UL25 225 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 HEY1Q9Y5J3 304 aa8.04□□□□□ -1.12
CCDC40-215ENST00000576033 TMEM131Q92545 1883 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms