RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 TRIM24O15164 1050 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 ATP9BO43861 1147 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TMCC1O94876 653 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 KAT7O95251 611 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 METTL18O95568 372 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 APODP05090 189 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 SRCP12931 536 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 NFKB1P19838 968 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TPSB2P20231 275 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 PSMB4P28070 264 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TNFRSF4P43489 277 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 VPS41P49754 854 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 GALK1P51570 392 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 ITGA8P53708 1063 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 GEMP55040 296 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 BASP1P80723 227 aaKnown RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 ITKQ08881 620 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 NAA30Q147X3 362 aaPredicted RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TPSAB1Q15661 275 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 ELF2Q15723 593 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 HIBCHQ6NVY1 386 aaPredicted RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 LINGO4Q6UY18 593 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 LEKR1Q6ZMV7 388 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 ATXN2LQ8WWM7 1075 aaKnown RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 CPT1BQ92523 772 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 CHFRQ96EP1 664 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 IMP4Q96G21 291 aaKnown RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 P2RY13Q9BPV8 354 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 CEP41Q9BYV8 373 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 FRMD8Q9BZ67 464 aaPredicted RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TSPYL1Q9H0U9 437 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 VPS45Q9NRW7 570 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 PLA2G4CQ9UP65 541 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 SHOC2Q9UQ13 582 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 STARD13Q9Y3M8 1113 aa12.09□□□□□ -0.47
PRPF8-212ENST00000575116 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
PRPF8-212ENST00000575116 TICRRQ7Z2Z1 1910 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 COL4A3Q01955 1670 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ESYT3A0FGR9 886 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 TBC1D3BA6NDS4 549 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 PRRT4C9JH25 899 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 E7EVH7 732 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 AP3B1O00203 1094 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 NPC1O15118 1278 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 GSRP00390 522 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 MT-CO1P00395 513 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ASGR2P07307 311 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 HNRNPLP14866 589 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 CR2P20023 1033 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 CTHP32929 405 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 CTSOP43234 321 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 MAPK8P45983 427 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 CARSP49589 748 aaKnown RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 RHOAP61586 193 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ST8SIA6P61647 398 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ZP2Q05996 745 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 KDSRQ06136 332 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 CBLBQ13191 982 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 MPP3Q13368 585 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 KCNJ11Q14654 390 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 PPP1R21Q6ZMI0 780 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 PCDH20Q8N6Y1 951 aaKnown RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 NAT8LQ8N9F0 302 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 MCUQ8NE86 351 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ARRDC2Q8TBH0 407 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 TADA1Q96BN2 335 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ZNF419Q96HQ0 510 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 RPL10LQ96L21 214 aaKnown RBP12.08□□□□□ -0.48
PRPF8-212ENST00000575116 MRGPRX3Q96LB0 322 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 NUDCD1Q96RS6 583 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 HINFPQ9BQA5 517 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 CIPCQ9C0C6 399 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ZDHHC18Q9NUE0 388 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 LHX3Q9UBR4 397 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 FAM153AQ9UHL3 310 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 DUSP12Q9UNI6 340 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 ACTL7AQ9Y615 435 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 COL4A2P08572 1712 aa12.08□□□□□ -0.48
PRPF8-212ENST00000575116 MUSKO15146 869 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 TP73O15350 636 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 INSIG1O15503 277 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 SMAD6O43541 496 aaKnown RBP12.07□□□□□ -0.48
PRPF8-212ENST00000575116 SUN1O94901 812 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 AP2A1O95782 977 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 APRTP07741 180 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 SERPINF2P08697 491 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 DRD1P21728 446 aa12.07□□□□□ -0.48
PRPF8-212ENST00000575116 LMAN1P49257 510 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms