RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 RAMP2O60895 175 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 WNT1P04628 370 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TBC1D3HP0C7X1 549 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CD46P15529 392 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 RHOQP17081 205 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CHRNA3P32297 505 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CTSKP43235 329 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 MAPKAPK2P49137 400 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CCT8P50990 548 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CCR5P51681 352 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 ZNF143P52747 638 aaPredicted RBP10.19□□□□□ -0.78
RPA1-206ENST00000573994 RACK1P63244 317 aaKnown RBP10.19□□□□□ -0.78
RPA1-206ENST00000573994 SHC2P98077 582 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 NRG1Q02297 640 aaPredicted RBP10.19□□□□□ -0.78
RPA1-206ENST00000573994 SCAPQ12770 1279 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 PRAMEF14Q5SWL7 426 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 PIP5KL1Q5T9C9 394 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TBC1D3GQ6DHY5 549 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TBC1D3CQ6IPX1 549 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 RETSATQ6NUM9 610 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 ZNF783Q6ZMS7 281 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 DPY19L3Q6ZPD9 716 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TMC6Q7Z403 805 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 SLFN11Q7Z7L1 901 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 ZNF354CQ86Y25 554 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TBC1D3Q8IZP1 549 aaPredicted RBP10.19□□□□□ -0.78
RPA1-206ENST00000573994 NTAN1Q96AB6 310 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CCDC114Q96M63 670 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 MYOCQ99972 504 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CNPY3Q9BT09 278 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TRIM7Q9C029 511 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 TTYH3Q9C0H2 523 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 OSBPL2Q9H1P3 480 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 HAUS4Q9H6D7 363 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 DYRK4Q9NR20 520 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 PCOLCE2Q9UKZ9 415 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 CA5BQ9Y2D0 317 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 BTBD3Q9Y2F9 522 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 ZFHX4Q86UP3 3567 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
RPA1-206ENST00000573994 NYNRINQ9P2P1 1898 aaKnown RBP10.19□□□□□ -0.78
RPA1-206ENST00000573994 C10orf142B7Z368 130 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.78
RPA1-206ENST00000573994 SLC7A4O43246 635 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 CREB3O43889 395 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 ZNF821O75541 412 aaPredicted RBP10.18□□□□□ -0.78
RPA1-206ENST00000573994 LEFTY1O75610 366 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 CD160O95971 181 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 PRNPP04156 253 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 SKILP12757 684 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 PRLRP16471 622 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 DESP17661 470 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 PSMA2P25787 234 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 EPHB2P29323 1055 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 RECQLP46063 649 aaPredicted RBP10.18□□□□□ -0.78
RPA1-206ENST00000573994 CCNHP51946 323 aaPredicted RBP10.18□□□□□ -0.78
RPA1-206ENST00000573994 TAS2R38P59533 333 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 TPM4P67936 248 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 FANCCQ00597 558 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 SLC20A2Q08357 652 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 KLHL30Q0D2K2 578 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 CCDC15Q0P6D6 951 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 MAMLD1Q13495 774 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 TRIP6Q15654 476 aaKnown RBP10.18□□□□□ -0.78
RPA1-206ENST00000573994 RYBPQ8N488 228 aaPredicted RBP10.18□□□□□ -0.78
RPA1-206ENST00000573994 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 KLK6Q92876 244 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 ARHGEF2Q92974 986 aaKnown RBP10.18□□□□□ -0.78
RPA1-206ENST00000573994 FAM131CQ96AQ9 280 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 ZNF653Q96CK0 615 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 SCNM1Q9BWG6 230 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 CEP44Q9C0F1 390 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 KDM4CQ9H3R0 1056 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 ZDHHC6Q9H6R6 413 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 FZD3Q9NPG1 666 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 TMEM248Q9NWD8 314 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 IL36AQ9UHA7 158 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 KLK13Q9UKR3 277 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 FZD10Q9ULW2 581 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 WASF3Q9UPY6 502 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 PCDHB9Q9Y5E1 797 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 WDFY3Q8IZQ1 3526 aa10.18□□□□□ -0.78
RPA1-206ENST00000573994 A0A1W2PR77 199 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 VILLO15195 856 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 LATO43561 262 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 RNGTTO60942 597 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 CBFA2T3O75081 653 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 FTH1P19P0C7X4 201 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 ZNF883P0CG24 379 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 CD38P28907 300 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 GKP32189 559 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 NUDT1P36639 197 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 ETFBP38117 255 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 NR1I3Q14994 352 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 POLD3Q15054 466 aaPredicted RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 CA9Q16790 459 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 ST3GAL2Q16842 350 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 ZNF423Q2M1K9 1284 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms