RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 KRT37O76014 449 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 MT-CYBP00156 380 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 C1QAP02745 245 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 ADRA1DP25100 572 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 CNTFP26441 200 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 ATP1A2P50993 1020 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 SGSHP51688 502 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 SLC18A1P54219 525 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 MGAT5Q09328 741 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 SLC12A1Q13621 1099 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 CDH18Q13634 790 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 LAMB3Q13751 1172 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 TMED2Q15363 201 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 FYB2Q5VWT5 728 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 ALG1LQ6GMV1 187 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 PKN3Q6P5Z2 889 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 GRASPQ7Z6J2 395 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 TRABD2AQ86V40 505 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 CTAGE3PQ8IX95 158 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 PPM1NQ8N819 430 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 FIBINQ8TAL6 211 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 DCAKDQ8WVC6 231 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 PPP2R3CQ969Q6 453 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 ZNF707Q96C28 371 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 GDF15Q99988 308 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 CINPQ9BW66 212 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 PBX4Q9BYU1 374 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 SLC28A3Q9HAS3 691 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 PLAC1Q9HBJ0 212 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 SSU72Q9NP77 194 aaKnown RBP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 CTNNAL1Q9UBT7 734 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 MRPS23Q9Y3D9 190 aaKnown RBP13.07□□□□□ -0.32
PRPF8-207ENST00000573681 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
PRPF8-207ENST00000573681 LOC285095A0A1B0GVY8 99 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 CBX4O00257 560 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ATP9BO43861 1147 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SHOX2O60902 331 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 FAM155BO75949 473 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 KRT38O76015 456 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MT-ND3P03897 115 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MMP2P08253 660 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 BRAFP15056 766 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 TPH1P17752 444 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 GBP2P32456 591 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 PBX2P40425 430 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 CD86P42081 329 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 PLK1P53350 603 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 DSC2Q02487 901 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 DNAJC3Q13217 504 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 CRYMQ14894 314 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 CYTH1Q15438 398 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 RALGPS1Q5JS13 557 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 CERCAMQ5T4B2 595 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 STXBP5Q5T5C0 1151 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 RETSATQ6NUM9 610 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 PGBD5Q8N414 524 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 PPHLN1Q8NEY8 458 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 OR52K2Q8NGK3 314 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SMG7Q92540 1137 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ACDQ96AP0 544 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ALKBH8Q96BT7 664 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 OTUB2Q96DC9 234 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MRRFQ96E11 262 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ALG14Q96F25 216 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ZNF419Q96HQ0 510 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 FEM1CQ96JP0 617 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 RANBP9Q96S59 729 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SMC6Q96SB8 1091 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SEMA3CQ99985 751 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 SELENOSQ9BQE4 189 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 APOL2Q9BQE5 337 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MGME1Q9BQP7 344 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 TRABDQ9H4I3 376 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 MRM3Q9HC36 420 aaKnown RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 KCNK9Q9NPC2 374 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 DZANK1Q9NVP4 752 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-207ENST00000573681 OR51B4Q9Y5P0 310 aa13.06□□□□□ -0.32
PRPF8-207ENST00000573681 ZMPSTE24O75844 475 aa13.05□□□□□ -0.32
PRPF8-207ENST00000573681 SERPINF2P08697 491 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms