RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KDF1Q8NAX2 398 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 NTAN1Q96AB6 310 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 FAM131CQ96AQ9 280 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 KLHDC7BQ96G42 594 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 CNDP2Q96KP4 475 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 EPAS1Q99814 870 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 HEPHQ9BQS7 1158 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 OSBPL2Q9H1P3 480 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 NDFIP2Q9NV92 336 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 TMEM248Q9NWD8 314 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 ARHGAP20Q9P2F6 1191 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 ZNF212Q9UDV6 495 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 ACTL7AQ9Y615 435 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 CFAP47Q6ZTR5 3102 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
NPLOC4-212ENST00000573328 DMXL2Q8TDJ6 3036 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 LRRC10BA6NIK2 292 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 SIGLEC16A6NMB1 481 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 KRIT1O00522 736 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 NEMP1O14524 444 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ENC1O14682 589 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 TEX33O43247 280 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ATMINO43313 823 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 SDC3O75056 442 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ZMPSTE24O75844 475 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 LDOC1O95751 146 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 THEGLP0DJG4 465 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 HNRNPA2B1P22626 353 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ITGB7P26010 798 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 EPHB2P29323 1055 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ZNF143P52747 638 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 SNRPD1P62314 119 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 RPL7AP62424 266 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 OVGP1Q12889 678 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 BNIP3Q12983 259 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ASIC2Q16515 512 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 HS1BP3Q53T59 392 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 PPP1R2P3Q6NXS1 205 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 APTXQ7Z2E3 356 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 PTAR1Q7Z6K3 402 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 IQCHQ86VS3 1027 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 NLRP14Q86W24 1093 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 HORMAD1Q86X24 394 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 PYROXD2Q8N2H3 581 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 GALNT15Q8N3T1 639 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 EID2Q8N6I1 236 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 OR6K2Q8NGY2 324 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 CENPIQ92674 756 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ARHGEF2Q92974 986 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 HDAC8Q9BY41 377 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 MAGEB5Q9BZ81 275 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 MAGEH1Q9H213 219 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 HSD3B7Q9H2F3 369 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 RETREG1Q9H6L5 497 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 CATSPERBQ9H7T0 1116 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 TOR4AQ9NXH8 423 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 HECAQ9UBI9 543 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 WASF2Q9Y6W5 498 aa9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 ARID1BQ8NFD5 2236 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-212ENST00000573328 FREM2Q5SZK8 3169 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ZSCAN5CA6NGD5 496 aaPredicted RBP9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 RNF103O00237 685 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 BUB1O43683 1085 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 IGSF6O95976 241 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 SERPINC1P01008 464 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 UGT2B4P06133 528 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ADRB3P13945 408 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 PSMA2P25787 234 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 L1CAMP32004 1257 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 GKP32189 559 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ZNF165P49910 485 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 TPI1P60174 286 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 TPM4P67936 248 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 RAD51Q06609 339 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 SCAPQ12770 1279 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 DNAJC3Q13217 504 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 SHBQ15464 509 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ZNF284Q2VY69 593 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ARTNQ5T4W7 220 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 SEL1L3Q68CR1 1132 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ACAD10Q6JQN1 1059 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 KIAA1161Q6NSJ0 714 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 NEK5Q6P3R8 708 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 DHRS13Q6UX07 377 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 PARS2Q7L3T8 475 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 TMC6Q7Z403 805 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 SPATS2Q86XZ4 545 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 MCOLN2Q8IZK6 566 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 SAP25Q8TEE9 199 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 NCAPGQ9BPX3 1015 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 BPIFA3Q9BQP9 254 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 CNPY3Q9BT09 278 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 CCDC86Q9H6F5 360 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 ERVMER34-1Q9H9K5 563 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 FZD10Q9ULW2 581 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 MYO6Q9UM54 1294 aa9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 NEU3Q9UQ49 428 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms