RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CACNA1BQ00975 2339 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 ZZEF1O43149 2961 aa17.64■□□□□ 0.42
SMG6-212ENST00000573153 TBC1D3DA0A087WVF3 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3IA0A087WXS9 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3EA0A087X179 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3KA0A087X1G2 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3FA6NER0 549 aaPredicted RBP17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3LB9A6J9 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 KRT37O76014 449 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3HP0C7X1 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 MAT2AP31153 395 aaKnown RBP17.64■□□□□ 0.41
SMG6-212ENST00000573153 GKP32189 559 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 ETFBP38117 255 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 CCT8P50990 548 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 CCNHP51946 323 aaPredicted RBP17.64■□□□□ 0.41
SMG6-212ENST00000573153 CA9Q16790 459 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 ZNF284Q2VY69 593 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3GQ6DHY5 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3CQ6IPX1 549 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 RETSATQ6NUM9 610 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 RWDD4Q6NW29 188 aaKnown RBP17.64■□□□□ 0.41
SMG6-212ENST00000573153 LRSAM1Q6UWE0 723 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 UNQ6494/PRO21346Q6UXR6 183 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 PLPP6Q8IY26 295 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 TBC1D3Q8IZP1 549 aaPredicted RBP17.64■□□□□ 0.41
SMG6-212ENST00000573153 GRIN3AQ8TCU5 1115 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 SAP25Q8TEE9 199 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 ISG20Q96AZ6 181 aaKnown RBP17.64■□□□□ 0.41
SMG6-212ENST00000573153 SERAC1Q96JX3 654 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 MAGEH1Q9H213 219 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 PARVAQ9NVD7 372 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 IL36AQ9UHA7 158 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 PTPRBP23467 1997 aa17.64■□□□□ 0.41
SMG6-212ENST00000573153 FREM2Q5SZK8 3169 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 TMEM191CA6NGB0 347 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 KPNA3O00505 521 aaPredicted RBP17.63■□□□□ 0.41
SMG6-212ENST00000573153 PRNPP04156 253 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 PROS1P07225 676 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 ATXN1LP0C7T5 689 aaKnown RBP17.63■□□□□ 0.41
SMG6-212ENST00000573153 ABL2P42684 1182 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 UBASH3AP57075 661 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 KLHL30Q0D2K2 578 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 ST3GAL2Q16842 350 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 CARD16Q5EG05 197 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 DCUN1D2Q6PH85 259 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 ERN2Q76MJ5 926 aaKnown RBP17.63■□□□□ 0.41
SMG6-212ENST00000573153 PARS2Q7L3T8 475 aaKnown RBP17.63■□□□□ 0.41
SMG6-212ENST00000573153 MFSD2AQ8NA29 543 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 FNIP1Q8TF40 1166 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 PDFQ9HBH1 243 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 GPR27Q9NS67 375 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 GPATCH2LQ9NWQ4 482 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 DMTF1Q9Y222 760 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 MSRB2Q9Y3D2 182 aa17.63■□□□□ 0.41
SMG6-212ENST00000573153 BZW2Q9Y6E2 419 aaKnown RBP17.63■□□□□ 0.41
SMG6-212ENST00000573153 TMCO5BA8MYB1 307 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 GOLGA6L19H0YKK7 550 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 TLR4O00206 839 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 KDELR3O43731 214 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 RAMP2O60895 175 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 RNGTTO60942 597 aaKnown RBP17.62■□□□□ 0.41
SMG6-212ENST00000573153 ITGB7P26010 798 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 EPHA8P29322 1005 aaPredicted RBP17.62■□□□□ 0.41
SMG6-212ENST00000573153 HTR7P34969 479 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 RXRGP48443 463 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 EFHC2Q5JST6 749 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 SEL1L3Q68CR1 1132 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 LEKR1Q6ZMV7 388 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 GCNT7Q6ZNI0 430 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 IQCHQ86VS3 1027 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 HORMAD1Q86X24 394 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 GATAD2AQ86YP4 633 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 UMODL1-AS1Q8N2C9 162 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 KDF1Q8NAX2 398 aaPredicted RBP17.62■□□□□ 0.41
SMG6-212ENST00000573153 NETO2Q8NC67 525 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 HMCESQ96FZ2 354 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 CCDC114Q96M63 670 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 HEPHQ9BQS7 1158 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 TM6SF2Q9BZW4 377 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 ISCUQ9H1K1 167 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 LRRC19Q9H756 370 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 AASDHPPTQ9NRN7 309 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 NENFQ9UMX5 172 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 FADS3Q9Y5Q0 445 aa17.62■□□□□ 0.41
SMG6-212ENST00000573153 A0A1W2PQU0 124 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 EIF3CLB5ME19 914 aaKnown RBP17.61■□□□□ 0.41
SMG6-212ENST00000573153 TRIM16O95361 564 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 GSRP00390 522 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 FTLP02792 175 aaPredicted RBP17.61■□□□□ 0.41
SMG6-212ENST00000573153 SKILP12757 684 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 ADRB3P13945 408 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 PRLRP16471 622 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 DESP17661 470 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 EPHB2P29323 1055 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 NUDT1P36639 197 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 ZBED6P86452 979 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 NEK5Q6P3R8 708 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 OR6K2Q8NGY2 324 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 SETD7Q8WTS6 366 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms