RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KLC2Q9H0B6 622 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 CCDC86Q9H6F5 360 aaKnown RBP18.47■□□□□ 0.55
CHD3-214ENST00000572579 UCKL1Q9NWZ5 548 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 ADAM22Q9P0K1 906 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 DNAI1Q9UI46 699 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 GPSM3Q9Y4H4 160 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 CACNA1GO43497 2377 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 SPINT1O43278 529 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 PRNPP04156 253 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 KRT3P12035 628 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 RHOQP17081 205 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 NUDT1P36639 197 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 CCNHP51946 323 aaPredicted RBP18.46■□□□□ 0.55
CHD3-214ENST00000572579 SLC20A2Q08357 652 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 SLC45A4Q5BKX6 768 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 RETSATQ6NUM9 610 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 RWDD4Q6NW29 188 aaKnown RBP18.46■□□□□ 0.55
CHD3-214ENST00000572579 TRIM72Q6ZMU5 477 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 GCNT7Q6ZNI0 430 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 SLC22A18ASQ8N1D0 253 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 PCDH20Q8N6Y1 951 aaKnown RBP18.46■□□□□ 0.55
CHD3-214ENST00000572579 OR13H1Q8NG92 308 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 OR6K2Q8NGY2 324 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 BAP1Q92560 729 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 KLHDC7BQ96G42 594 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 BMFQ96LC9 184 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 HEPHQ9BQS7 1158 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 SYT11Q9BT88 431 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 TMEM248Q9NWD8 314 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 RAXQ9Y2V3 346 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 FARP1Q9Y4F1 1045 aaPredicted RBP18.46■□□□□ 0.55
CHD3-214ENST00000572579 FADS3Q9Y5Q0 445 aa18.46■□□□□ 0.55
CHD3-214ENST00000572579 SIGLEC16A6NMB1 481 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 THEGLP0DJG4 465 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 ADRB3P13945 408 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 ARRB1P49407 418 aaPredicted RBP18.45■□□□□ 0.54
CHD3-214ENST00000572579 DNA2P51530 1060 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 RPL7AP62424 266 aaKnown RBP18.45■□□□□ 0.54
CHD3-214ENST00000572579 MYL5Q02045 173 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 OGDHQ02218 1023 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 UBXN1Q04323 297 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 CYP4F3Q08477 520 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 OVGP1Q12889 678 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 PROX2Q3B8N5 592 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 PPP1R15BQ5SWA1 713 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 C19orf48Q6RUI8 117 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 AGPAT1Q99943 283 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 TM6SF2Q9BZW4 377 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 ANO10Q9NW15 660 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 TAS2R14Q9NYV8 317 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 HECAQ9UBI9 543 aaPredicted RBP18.45■□□□□ 0.54
CHD3-214ENST00000572579 GGT7Q9UJ14 662 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 PCDHGA1Q9Y5H4 931 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 NYNRINQ9P2P1 1898 aaKnown RBP18.45■□□□□ 0.54
CHD3-214ENST00000572579 ACACAQ13085 2346 aa18.45■□□□□ 0.54
CHD3-214ENST00000572579 SMG1Q96Q15 3661 aaKnown RBP18.45■□□□□ 0.54
CHD3-214ENST00000572579 YKT6O15498 198 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 TEX33O43247 280 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 ITGB7P26010 798 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 L1CAMP32004 1257 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 ABL2P42684 1182 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 NSFP46459 744 aaKnown RBP18.44■□□□□ 0.54
CHD3-214ENST00000572579 STX1AQ16623 288 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 TPRG1LQ5T0D9 272 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 SASS6Q6UVJ0 657 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 PARS2Q7L3T8 475 aaKnown RBP18.44■□□□□ 0.54
CHD3-214ENST00000572579 IRF2BP2Q7Z5L9 587 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 ABI3BPQ7Z7G0 1075 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 DNAAF5Q86Y56 855 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 PLPP6Q8IY26 295 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 GALNT15Q8N3T1 639 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 C3orf20Q8ND61 904 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 NTAN1Q96AB6 310 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 ISG20Q96AZ6 181 aaKnown RBP18.44■□□□□ 0.54
CHD3-214ENST00000572579 KLF6Q99612 283 aaPredicted RBP18.44■□□□□ 0.54
CHD3-214ENST00000572579 GPR27Q9NS67 375 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 KLHL11Q9NVR0 708 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 DKK4Q9UBT3 224 aa18.44■□□□□ 0.54
CHD3-214ENST00000572579 DOCK4Q8N1I0 1966 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 POM121BA6NF01 834 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 CCP110O43303 1012 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 SIGLEC6O43699 453 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 PCDH8O95206 1070 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 PAK4O96013 591 aaPredicted RBP18.43■□□□□ 0.54
CHD3-214ENST00000572579 GPD1P21695 349 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 DGKAP23743 735 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 ANP32AP39687 249 aaKnown RBP18.43■□□□□ 0.54
CHD3-214ENST00000572579 MAPKAPK2P49137 400 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 NEK3P51956 506 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 INAVAQ3KP66 663 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 ARL13BQ3SXY8 428 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 FBXL19Q6PCT2 694 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 TMPRSS12Q86WS5 348 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 ARFGAP1Q8N6T3 406 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 TBC1D31Q96DN5 1066 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 CCDC114Q96M63 670 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 SLC17A9Q9BYT1 436 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 ITM2BQ9Y287 266 aa18.43■□□□□ 0.54
CHD3-214ENST00000572579 DAAM1Q9Y4D1 1078 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms