RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 RASSF3Q86WH2 238 aa12.21□□□□□ -0.46
TOM1L1-213ENST00000572405 TTC17Q96AE7 1141 aa12.21□□□□□ -0.46
TOM1L1-213ENST00000572405 CENPTQ96BT3 561 aa12.21□□□□□ -0.46
TOM1L1-213ENST00000572405 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.46
TOM1L1-213ENST00000572405 ATP13A1Q9HD20 1204 aa12.21□□□□□ -0.46
TOM1L1-213ENST00000572405 PSAT1Q9Y617 370 aa12.21□□□□□ -0.46
TOM1L1-213ENST00000572405 MIA3Q5JRA6 1907 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 TRAV19A0A0A6YYK7 116 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 PER2O15055 1255 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 LPXNO60711 386 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 LATS1O95835 1130 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 F7P08709 466 aaPredicted RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 NPY2RP49146 381 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 OXCT1P55809 520 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC7A9P82251 487 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 UBE3AQ05086 875 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 DMTNQ08495 405 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 MPP3Q13368 585 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 ANKRD20A4Q4UJ75 823 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 FSCBQ5H9T9 825 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SPANXN3Q5MJ09 141 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 RNF219Q5W0B1 726 aaPredicted RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 TMEM135Q86UB9 458 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 CARNMT1Q8N4J0 409 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC25A41Q8N5S1 370 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SHKBP1Q8TBC3 707 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 ARRDC2Q8TBH0 407 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 WFDC5Q8TCV5 224 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 CERS2Q96G23 380 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 PPP1R2P1Q96PQ5 205 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC46A2Q9BY10 475 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 MUC3BQ9H195 1237 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 NKIRAS1Q9NYS0 192 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF180Q9UJW8 692 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SOX13Q9UN79 622 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 TBC1D30Q9Y2I9 924 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 ILVBLA1L0T0 632 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 CBX4O00257 560 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 PRPF4O43172 522 aaKnown RBP eCLIP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 TYROBPO43914 113 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 USP1O94782 785 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 MT-ND3P03897 115 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 CA4P22748 312 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 NMBRP28336 390 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 RPA3P35244 121 aaPredicted RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 RANBP10Q6VN20 620 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 CYS1Q717R9 158 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 MARK2Q7KZI7 788 aaKnown RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SETD3Q86TU7 594 aaPredicted RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 BBS7Q8IWZ6 715 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 HJURPQ8NCD3 748 aaPredicted RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 LSM7Q9UK45 103 aaKnown RBP12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 CCL26Q9Y258 94 aa12.2□□□□□ -0.46
TOM1L1-213ENST00000572405 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 HMX2A2RU54 273 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 H0Y626 953 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 GFRA2O00451 464 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 NDUFAB1O14561 156 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 CLASP2O75122 1294 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 KRT37O76014 449 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 MZF1P28698 734 aaPredicted RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 WDR4P57081 412 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 NTHL1P78549 312 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 TNK2Q07912 1038 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 MGAT5Q09328 741 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SHHQ15465 462 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC5A9Q2M3M2 681 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 GPR158Q5T848 1215 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 CDKL2Q92772 493 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 EXOC2Q96KP1 924 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 POLR1EQ9GZS1 481 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 C12orf65Q9H3J6 166 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 RETREG1Q9H6L5 497 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 CERS4Q9HA82 394 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 ZFATQ9P243 1243 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 UBA2Q9UBT2 640 aaPredicted RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SH3BP1Q9Y3L3 701 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 GMNCA6NCL1 334 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 GOLGA8TH3BQL2 631 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 LEFTY2O00292 366 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 KDELR3O43731 214 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SNAP91O60641 907 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 RHOP08100 348 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SNRPAP09012 282 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 PYGBP11216 843 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 RGRP47804 291 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 SEPT6Q14141 434 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 TEAD2Q15562 447 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 ZSCAN26Q16670 478 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms