RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 KIAA1161Q6NSJ0 714 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 DPY19L3Q6ZPD9 716 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 WDR36Q8NI36 951 aaKnown RBP20.27■□□□□ 0.84
CCDC40-206ENST00000572083 GRAMD1AQ96CP6 724 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 IL12RB2Q99665 862 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.84
CCDC40-206ENST00000572083 INTS2Q9H0H0 1204 aaKnown RBP20.27■□□□□ 0.84
CCDC40-206ENST00000572083 SYNDIG1Q9H7V2 258 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.27■□□□□ 0.84
CCDC40-206ENST00000572083 SNX10Q9Y5X0 201 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 CSNK1G3Q9Y6M4 447 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 WASF2Q9Y6W5 498 aa20.27■□□□□ 0.84
CCDC40-206ENST00000572083 PSMA7O14818 248 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 SPINT1O43278 529 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 TCEA3O75764 348 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 ADCY5O95622 1261 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 GLI1P08151 1106 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 RECQLP46063 649 aaPredicted RBP20.26■□□□□ 0.83
CCDC40-206ENST00000572083 C5orf22Q49AR2 442 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 ISM2Q6H9L7 571 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 FAM183BPQ6ZVS7 135 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 TFAP2DQ7Z6R9 452 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 CLEC14AQ86T13 490 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 PASD1Q8IV76 773 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 RBFAQ8N0V3 343 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 DCAF4L2Q8NA75 395 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 TPCN2Q8NHX9 752 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 SMARCE1Q969G3 411 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 TCEAL2Q9H3H9 227 aaPredicted RBP20.26■□□□□ 0.83
CCDC40-206ENST00000572083 UBE2TQ9NPD8 197 aaPredicted RBP20.26■□□□□ 0.83
CCDC40-206ENST00000572083 ANLNQ9NQW6 1124 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 ASNSD1Q9NWL6 643 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 SALL4Q9UJQ4 1053 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 FADS3Q9Y5Q0 445 aa20.26■□□□□ 0.83
CCDC40-206ENST00000572083 UBR5O95071 2799 aaPredicted RBP20.26■□□□□ 0.83
CCDC40-206ENST00000572083 M0QYT0 321 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 SMC2O95347 1197 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 CD44P16070 742 aaKnown RBP20.25■□□□□ 0.83
CCDC40-206ENST00000572083 CLCN6P51797 869 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 ARL13BQ3SXY8 428 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 EFHC1Q5JVL4 640 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 OTUD1Q5VV17 481 aaPredicted RBP20.25■□□□□ 0.83
CCDC40-206ENST00000572083 SLC35F3Q8IY50 421 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 FMR1NBQ8N0W7 255 aaPredicted RBP20.25■□□□□ 0.83
CCDC40-206ENST00000572083 EXD3Q8N9H8 876 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 OR7D4Q8NG98 312 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 FEM1CQ96JP0 617 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 PPP1R13BQ96KQ4 1090 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 CCNL2Q96S94 520 aaPredicted RBP20.25■□□□□ 0.83
CCDC40-206ENST00000572083 FAM117AQ9C073 453 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 HEMK1Q9Y5R4 338 aaPredicted RBP20.25■□□□□ 0.83
CCDC40-206ENST00000572083 RP1P56715 2156 aa20.25■□□□□ 0.83
CCDC40-206ENST00000572083 PTPN13Q12923 2485 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 I6L893 689 aaPredicted RBP20.24■□□□□ 0.83
CCDC40-206ENST00000572083 FPGTO14772 594 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 ZNF821O75541 412 aaPredicted RBP20.24■□□□□ 0.83
CCDC40-206ENST00000572083 DAB1O75553 588 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 ITGB7P26010 798 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 CSRP3P50461 194 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 EIF2B5Q13144 721 aaKnown RBP20.24■□□□□ 0.83
CCDC40-206ENST00000572083 MTA1Q13330 715 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 C1orf61Q13536 156 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 STIM1Q13586 685 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 C6orf132Q5T0Z8 1188 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 OLFML1Q6UWY5 402 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 PARS2Q7L3T8 475 aaKnown RBP20.24■□□□□ 0.83
CCDC40-206ENST00000572083 WDTC1Q8N5D0 677 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 SPATA20Q8TB22 786 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 KLF6Q99612 283 aaPredicted RBP20.24■□□□□ 0.83
CCDC40-206ENST00000572083 CCDC3Q9BQI4 270 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 BOCQ9BWV1 1114 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 TKTL2Q9H0I9 626 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 PIGVQ9NUD9 493 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 MPP6Q9NZW5 540 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 APOBEC3BQ9UH17 382 aaKnown RBP20.24■□□□□ 0.83
CCDC40-206ENST00000572083 GGT7Q9UJ14 662 aa20.24■□□□□ 0.83
CCDC40-206ENST00000572083 CCDC187A0A096LP49 1063 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 IGLON5A6NGN9 336 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 TPP1O14773 563 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 GCATO75600 419 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 ITGA2BP08514 1039 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 TFE3P19532 575 aaPredicted RBP20.23■□□□□ 0.83
CCDC40-206ENST00000572083 L1CAMP32004 1257 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 DNA2P51530 1060 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 NFKB2Q00653 900 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 SPIDRQ14159 915 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 PRRT3Q5FWE3 981 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 KLHL10Q6JEL2 608 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 GJB7Q6PEY0 223 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 C11orf57Q6ZUT1 292 aaPredicted RBP20.23■□□□□ 0.83
CCDC40-206ENST00000572083 SETD3Q86TU7 594 aaPredicted RBP20.23■□□□□ 0.83
CCDC40-206ENST00000572083 TRIM59Q8IWR1 403 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 ZNF683Q8IZ20 524 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 ATXN7L1Q9ULK2 861 aaPredicted RBP20.23■□□□□ 0.83
CCDC40-206ENST00000572083 PNMA8BQ9ULN7 279 aaPredicted RBP20.23■□□□□ 0.83
CCDC40-206ENST00000572083 ITM2BQ9Y287 266 aa20.23■□□□□ 0.83
CCDC40-206ENST00000572083 RIOK3O14730 519 aaKnown RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 EFSO43281 561 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 AFPP02771 609 aaKnown RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 ERBB2P04626 1255 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms