RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 RFTN1Q14699 578 aaPredicted RBP16.45■□□□□ 0.22
LITAF-210ENST00000571976 PAFAH1B3Q15102 231 aaKnown RBP16.45■□□□□ 0.22
LITAF-210ENST00000571976 CYTH1Q15438 398 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 IFI16Q16666 785 aaKnown RBP16.45■□□□□ 0.22
LITAF-210ENST00000571976 ARSIQ5FYB1 569 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 LYSMD4Q5XG99 296 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 LRRC49Q8IUZ0 686 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 TP53INP2Q8IXH6 220 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 DCLK2Q8N568 766 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 GPR161Q8N6U8 529 aaKnown RBP16.45■□□□□ 0.22
LITAF-210ENST00000571976 NETO2Q8NC67 525 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 LRIG1Q96JA1 1093 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 ZNF599Q96NL3 588 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 RNF157Q96PX1 679 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 GOLPH3Q9H4A6 298 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 SERGEFQ9UGK8 458 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
LITAF-210ENST00000571976 NYNRINQ9P2P1 1898 aaKnown RBP16.45■□□□□ 0.22
LITAF-210ENST00000571976 THADAQ6YHU6 1953 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 OTOGLQ3ZCN5 2332 aa16.45■□□□□ 0.22
LITAF-210ENST00000571976 C3orf70A6NLC5 250 aaPredicted RBP16.44■□□□□ 0.22
LITAF-210ENST00000571976 METTL12A8MUP2 240 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 SLC7A4O43246 635 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 NRDCO43847 1150 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 PALMO75781 387 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 POP4O95707 220 aaKnown RBP16.44■□□□□ 0.22
LITAF-210ENST00000571976 SEMA4FO95754 770 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 DRD3P35462 400 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 CCDC15Q0P6D6 951 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 MYLK3Q32MK0 819 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 SYCP2LQ5T4T6 812 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 NCBP2-AS2Q69YL0 99 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 ARHGAP36Q6ZRI8 547 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 ARMCX6Q7L4S7 300 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 CYP2U1Q7Z449 544 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 RYBPQ8N488 228 aaPredicted RBP16.44■□□□□ 0.22
LITAF-210ENST00000571976 PQLC3Q8N755 202 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 KIAA1524Q8TCG1 905 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 RNF25Q96BH1 459 aaPredicted RBP16.44■□□□□ 0.22
LITAF-210ENST00000571976 HSPA12BQ96MM6 686 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 MAK16Q9BXY0 300 aaKnown RBP16.44■□□□□ 0.22
LITAF-210ENST00000571976 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
LITAF-210ENST00000571976 RIF1Q5UIP0 2472 aaKnown RBP16.43■□□□□ 0.22
LITAF-210ENST00000571976 LRRC72A6NJI9 287 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 KPNA3O00505 521 aaPredicted RBP16.43■□□□□ 0.22
LITAF-210ENST00000571976 MAFKO60675 156 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 LEFTY1O75610 366 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 IGSF6O95976 241 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 MPLP40238 635 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 METAP1P53582 386 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 RAD51Q06609 339 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 POM121L1PQ3SYA9 428 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 WDR45BQ5MNZ6 344 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 PLA2G2CQ5R387 149 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 TMCO4Q5TGY1 634 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.43■□□□□ 0.22
LITAF-210ENST00000571976 SLC41A1Q8IVJ1 513 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 ATPAF2Q8N5M1 289 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 GRIN3AQ8TCU5 1115 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.43■□□□□ 0.22
LITAF-210ENST00000571976 ANP32BQ92688 251 aaKnown RBP16.43■□□□□ 0.22
LITAF-210ENST00000571976 FAM131CQ96AQ9 280 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 PPP1R16AQ96I34 528 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 KDM4CQ9H3R0 1056 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 DYRK4Q9NR20 520 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 VPS45Q9NRW7 570 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 LHX3Q9UBR4 397 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 WASF2Q9Y6W5 498 aa16.43■□□□□ 0.22
LITAF-210ENST00000571976 SDK1Q7Z5N4 2213 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 KRIT1O00522 736 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 FOXD2O60548 495 aaPredicted RBP16.42■□□□□ 0.22
LITAF-210ENST00000571976 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.22
LITAF-210ENST00000571976 ZFXP17010 805 aaPredicted RBP16.42■□□□□ 0.22
LITAF-210ENST00000571976 MX2P20592 715 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 ITPKAP23677 461 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 HOXD12P35452 270 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 GALNT2Q10471 571 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 CNTN1Q12860 1018 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 CSRP2Q16527 193 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 ATXN7L2Q5T6C5 722 aaPredicted RBP16.42■□□□□ 0.22
LITAF-210ENST00000571976 SLC9A4Q6AI14 798 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 SYT12Q8IV01 421 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 RCOR2Q8IZ40 523 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 RNF10Q8N5U6 811 aaKnown RBP16.42■□□□□ 0.22
LITAF-210ENST00000571976 OR2T34Q8NGX1 318 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 OR6K2Q8NGY2 324 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 OR14C36Q8NHC7 312 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 NSMCE1Q8WV22 266 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 DNASE2BQ8WZ79 361 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 PIGKQ92643 395 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 CINPQ9BW66 212 aaPredicted RBP16.42■□□□□ 0.22
LITAF-210ENST00000571976 OSBPL1AQ9BXW6 950 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 TSGA10Q9BZW7 698 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 ZDHHC6Q9H6R6 413 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 SEMA4GQ9NTN9 838 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms