RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 L2HGDHQ9H9P8 463 aa14.08□□□□□ -0.15
RPAIN-209ENST00000571558 CD248Q9HCU0 757 aa14.08□□□□□ -0.15
RPAIN-209ENST00000571558 SMARCAL1Q9NZC9 954 aa14.08□□□□□ -0.15
RPAIN-209ENST00000571558 SLC12A6Q9UHW9 1150 aa14.08□□□□□ -0.15
RPAIN-209ENST00000571558 BPTFQ12830 3046 aa14.08□□□□□ -0.16
RPAIN-209ENST00000571558 CELSR3Q9NYQ7 3312 aa14.08□□□□□ -0.16
RPAIN-209ENST00000571558 A0A1B0GTW7 788 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 GOLGA6L7A0A1B0GV03 622 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 TCRBV7S2A1N4TA0A589 114 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 PDE2AO00408 941 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 DKK1O94907 266 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 KRT10P13645 584 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 NDUFV2P19404 249 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SLC6A4P31645 630 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 HTR7P34969 479 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 C19orf57Q0VDD7 668 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 GRIK2Q13002 908 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 C5orf22Q49AR2 442 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 DNTTIP2Q5QJE6 756 aaKnown RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 ADGRF1Q5T601 910 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SEL1L2Q5TEA6 688 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 RAP1GAP2Q684P5 730 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 DBX2Q6ZNG2 339 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 RFX8Q6ZV50 586 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SLCO6A1Q86UG4 719 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CCDC50Q8IVM0 306 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CADM4Q8NFZ8 388 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 UBL7Q96S82 380 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 GABRG3Q99928 467 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 HEMGNQ9BXL5 484 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SIK2Q9H0K1 926 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 ZDHHC4Q9NPG8 344 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SPHK2Q9NRA0 654 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 RNF14Q9UBS8 474 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 PCDHGB2Q9Y5G2 931 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 DRGXA6NNA5 263 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 E9PAM4 449 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 H3BRJ5 948 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 PGRMC1O00264 195 aaKnown RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CREB3O43889 395 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CER1O95813 267 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 FGGP02679 453 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 TACR2P21452 398 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 LLGL1Q15334 1064 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SIX1Q15475 284 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SLC9A4Q6AI14 798 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 FBXL22Q6P050 247 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 BBS12Q6ZW61 710 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 ZNF572Q7Z3I7 529 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CHPFQ8IZ52 775 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CAPZA3Q96KX2 299 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 PRICKLE1Q96MT3 831 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 EPAS1Q99814 870 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 PPARGC1AQ9UBK2 798 aaKnown RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 ZNF212Q9UDV6 495 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 LSM7Q9UK45 103 aaKnown RBP14.07□□□□□ -0.16
RPAIN-209ENST00000571558 CYP8B1Q9UNU6 501 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 SH3BP1Q9Y3L3 701 aa14.07□□□□□ -0.16
RPAIN-209ENST00000571558 ADAMTS9Q9P2N4 1935 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 CEP192Q8TEP8 1941 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 EEF2KO00418 725 aaKnown RBP14.06□□□□□ -0.16
RPAIN-209ENST00000571558 SCAMP3O14828 347 aaKnown RBP14.06□□□□□ -0.16
RPAIN-209ENST00000571558 FLRT2O43155 660 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 ARL4AP40617 200 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 CETN2P41208 172 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 IRAK1P51617 712 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 TPI1P60174 286 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 WHAMMP3Q1A5X7 153 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 ODF2Q5BJF6 829 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 RFWD3Q6PCD5 774 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 BBS7Q8IWZ6 715 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 PLD5Q8N7P1 536 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 NAT16Q8N8M0 369 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 LSM14AQ8ND56 463 aaKnown RBP14.06□□□□□ -0.16
RPAIN-209ENST00000571558 BAHD1Q8TBE0 780 aaPredicted RBP14.06□□□□□ -0.16
RPAIN-209ENST00000571558 SETD7Q8WTS6 366 aaKnown RBP14.06□□□□□ -0.16
RPAIN-209ENST00000571558 IGSF8Q969P0 613 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 TBC1D31Q96DN5 1066 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 P2RY11Q96G91 374 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 MRGPRX1Q96LB2 322 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 XPO6Q96QU8 1125 aaKnown RBP14.06□□□□□ -0.16
RPAIN-209ENST00000571558 PRDM16Q9HAZ2 1276 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 ETNK2Q9NVF9 386 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 VANGL2Q9ULK5 521 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 ZNF510Q9Y2H8 683 aa14.06□□□□□ -0.16
RPAIN-209ENST00000571558 CST8O60676 142 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 ERCC2P18074 760 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 AMPD1P23109 780 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 EPHB2P29323 1055 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 CD6P30203 668 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 SUZ12Q15022 739 aaKnown RBP14.05□□□□□ -0.16
RPAIN-209ENST00000571558 ANO4Q32M45 955 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 KAZNQ674X7 775 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 GRAMD4Q6IC98 578 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 NLRP14Q86W24 1093 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 CHSY1Q86X52 802 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 RFX6Q8HWS3 928 aa14.05□□□□□ -0.16
RPAIN-209ENST00000571558 CPXM2Q8N436 756 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms