RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 ARTNQ5T4W7 220 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 PIP5KL1Q5T9C9 394 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 CCDC185Q8N715 623 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 TMIEQ8NEW7 156 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 ADAMTS14Q8WXS8 1223 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 CENPIQ92674 756 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 NTAN1Q96AB6 310 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 MCEEQ96PE7 176 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 RETREG1Q9H6L5 497 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 IL36AQ9UHA7 158 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 AKAP13Q12802 2813 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 SIGLEC16A6NMB1 481 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 WNT9AO14904 365 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 TNFSF14O43557 240 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 RAMP2O60895 175 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZMPSTE24O75844 475 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 PLEKP08567 350 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZNF143P52747 638 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 NXPH1P58417 271 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ARF5P84085 180 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 SCAPQ12770 1279 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 OVGP1Q12889 678 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 FILIP1LQ4L180 1135 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 EFHC2Q5JST6 749 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 PRAMEF14Q5SWL7 426 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 PPP1R2P3Q6NXS1 205 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 DCUN1D2Q6PH85 259 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 WDR59Q6PJI9 974 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ERN2Q76MJ5 926 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 SLFN11Q7Z7L1 901 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 OXR1Q8N573 874 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 MFSD2AQ8NA29 543 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 KDF1Q8NAX2 398 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 CHST14Q8NCH0 376 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZCCHC14Q8WYQ9 949 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 TMEM248Q9NWD8 314 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ARHGAP20Q9P2F6 1191 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 FTSJ1Q9UET6 329 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 DNAI1Q9UI46 699 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 FREM2Q5SZK8 3169 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 KNL1Q8NG31 2342 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 CXorf51AA0A1B0GTR3 108 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 A0A1W2PQU0 124 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 FAM72CH0Y354 149 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 PRAMEF26H0Y7S4 382 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 CCP110O43303 1012 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 RNGTTO60942 597 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 LEFTY1O75610 366 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ITGAVP06756 1048 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ATXN1LP0C7T5 689 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 EPHA8P29322 1005 aaPredicted RBP12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ACVRL1P37023 503 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 CCNHP51946 323 aaPredicted RBP12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 NEK3P51956 506 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 TAS2R38P59533 333 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 STAT4Q14765 748 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 FAM72AQ5TYM5 149 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 FAM72DQ6L9T8 149 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 NEK5Q6P3R8 708 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 SCYL2Q6P3W7 929 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 SLCO6A1Q86UG4 719 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 IQCHQ86VS3 1027 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 HORMAD1Q86X24 394 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 FAM72BQ86X60 149 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 GATAD2AQ86YP4 633 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ARHGEF2Q92974 986 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 HEPHQ9BQS7 1158 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 CNPY3Q9BT09 278 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 TM6SF2Q9BZW4 377 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 MAGEH1Q9H213 219 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 NDFIP2Q9NV92 336 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZMIZ1Q9ULJ6 1067 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 NEU3Q9UQ49 428 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 WASF2Q9Y6W5 498 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZFHX4Q86UP3 3567 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
CTDNEP1-205ENST00000570828 TCRBV5S1A1TA0A578 114 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 SLC31A1O15431 190 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 TEX33O43247 280 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZNF821O75541 412 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 PCDH8O95206 1070 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 PRLRP16471 622 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms