RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 DYRK4Q9NR20 520 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 RAB20Q9NX57 234 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 HS3ST2Q9Y278 367 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 ARHGEF17Q96PE2 2063 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 CELSR2Q9HCU4 2923 aa10.67□□□□□ -0.7
CTDNEP1-202ENST00000570380 TCAF2A6NFQ2 919 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 K7ERQ8 282 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 KRT38O76015 456 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 APOEP02649 317 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 PRNPP04156 253 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 KRT13P13646 458 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 GTF2H1P32780 548 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 CD97P48960 835 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 IRAK1P51617 712 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 MAPK10P53779 464 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 OXCT1P55809 520 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 ENPEPQ07075 957 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 ZFP36L1Q07352 338 aaKnown RBP10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 FAM186BQ8IYM0 893 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 GRIN3AQ8TCU5 1115 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 RNF34Q969K3 372 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 FEM1CQ96JP0 617 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 TBATAQ96M53 351 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 PPP1R9BQ96SB3 815 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 SIRPGQ9P1W8 387 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 VPS28Q9UK41 221 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 TRAF3IP3Q9Y228 551 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 FADS3Q9Y5Q0 445 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 DOCK4Q8N1I0 1966 aa10.66□□□□□ -0.7
CTDNEP1-202ENST00000570380 IGLON5A6NGN9 336 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 KCNU1A8MYU2 1149 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 MTSS1O43312 755 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 SMAD6O43541 496 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 CALUO43852 315 aaPredicted RBP10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 PPP6R2O75170 966 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 FBXO21O94952 628 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 IGLV3-25P01717 112 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 ADRB3P13945 408 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 NR2F2P24468 414 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 CD82P27701 267 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 MCCD1P59942 119 aaPredicted RBP10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 CENPCQ03188 943 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 CUL2Q13617 745 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 FAXCQ5TGI0 409 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 TTC39BQ5VTQ0 682 aaPredicted RBP10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 FBXL22Q6P050 247 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 UBR7Q8N806 425 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 ARL10Q8N8L6 244 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 ATP11CQ8NB49 1132 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 NKD1Q969G9 470 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 TMEM159Q96B96 161 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 HSFY1Q96LI6 401 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 CCDC114Q96M63 670 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 PSMB7Q99436 277 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 ZSWIM1Q9BR11 485 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 C1QTNF2Q9BXJ5 285 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 IL36AQ9UHA7 158 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 KIAA1257Q9ULG3 409 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 WASF2Q9Y6W5 498 aa10.65□□□□□ -0.7
CTDNEP1-202ENST00000570380 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.71
CTDNEP1-202ENST00000570380 FBN2P35556 2912 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 RP1L1Q8IWN7 2480 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 SNAP91O60641 907 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 LEFTY1O75610 366 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 TRUB2O95900 331 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 LIFP15018 202 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 PDCP20941 246 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 SYT1P21579 422 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 RRM1P23921 792 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 PSMC2P35998 433 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 MXI1P50539 228 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 ARSDP51689 593 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 NEK3P51956 506 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 THOP1P52888 689 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 SGCGQ13326 291 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 EIF4EBP2Q13542 120 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 PTK2BQ14289 1009 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 NFIL3Q16649 462 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 RABGAP1LQ5R372 815 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 TMPRSS9Q7Z410 1059 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 ATCAYQ86WG3 371 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 ATP6V0D2Q8N8Y2 350 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 PCDH19Q8TAB3 1148 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 C9orf43Q8TAL5 461 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 SPATA20Q8TB22 786 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 FAM149B1Q96BN6 582 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 CENPTQ96BT3 561 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 RPRD1AQ96P16 312 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 CMKLR1Q99788 373 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 TMPRSS4Q9NRS4 437 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 EXOC1Q9NV70 894 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 DOLKQ9UPQ8 538 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 ESPL1Q14674 2120 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 ANKRD36A6QL64 1941 aa10.64□□□□□ -0.71
CTDNEP1-202ENST00000570380 STMND1H3BQB6 276 aa10.63□□□□□ -0.71
CTDNEP1-202ENST00000570380 M0QYV0 167 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms