RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 CASKIN2Q8WXE0 1202 aa9.76□□□□□ -0.85
HCCAT5-201ENST00000569990 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
HCCAT5-201ENST00000569990 TM6SF2Q9BZW4 377 aa9.76□□□□□ -0.85
HCCAT5-201ENST00000569990 FBXL12Q9NXK8 326 aa9.76□□□□□ -0.85
HCCAT5-201ENST00000569990 PCDHGA5Q9Y5G8 931 aa9.76□□□□□ -0.85
HCCAT5-201ENST00000569990 RIF1Q5UIP0 2472 aaKnown RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 A0A0U1RQJ8 604 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 BCLAF3A2AJT9 711 aaKnown RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 LRRD1A4D1F6 860 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 C3orf70A6NLC5 250 aaPredicted RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 C1QTNF3-AMACRE9PGA6 284 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 RNF103O00237 685 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ARHGAP6O43182 974 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 PSTPIP1O43586 416 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 MFSD11O43934 449 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 LRP3O75074 770 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 NDUFS2O75306 463 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 GSRP00390 522 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 PRNPP04156 253 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 KRT1P04264 644 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 TNNT1P13805 278 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 TGM1P22735 817 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 DRD3P35462 400 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 DHPSP49366 369 aaPredicted RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 DNA2P51530 1060 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 CCNHP51946 323 aaPredicted RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ZNF33AQ06730 810 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 IL10RBQ08334 325 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 KIF5AQ12840 1032 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 SFSWAPQ12872 951 aaKnown RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 PAFAH1B3Q15102 231 aaKnown RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 CYTH1Q15438 398 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 NCBP2-AS2Q69YL0 99 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ARHGAP36Q6ZRI8 547 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ARMCX6Q7L4S7 300 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 DAAM2Q86T65 1068 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 VSIG1Q86XK7 387 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 SLC41A1Q8IVJ1 513 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 LRRC8AQ8IWT6 810 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 TXLNBQ8N3L3 684 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 HDDC3Q8N4P3 179 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 DEFB119Q8N690 84 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 PQLC3Q8N755 202 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 TMIEQ8NEW7 156 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 CADM4Q8NFZ8 388 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 OR2AP1Q8NGE2 309 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 GRIN3AQ8TCU5 1115 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 GANCQ8TET4 914 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 FAM131CQ96AQ9 280 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 VOPP1Q96AW1 172 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ZNF419Q96HQ0 510 aaPredicted RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 RNF157Q96PX1 679 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 OMDQ99983 421 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 HINFPQ9BQA5 517 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 HEPHQ9BQS7 1158 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 GPR174Q9BXC1 333 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 BTBD1Q9H0C5 482 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 NEUROG2Q9H2A3 272 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ARRDC1-AS1Q9H2J1 176 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 SP110Q9HB58 689 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 SGK2Q9HBY8 427 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 DDX56Q9NY93 547 aaKnown RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 LHX3Q9UBR4 397 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 UBA2Q9UBT2 640 aaPredicted RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 TRIM10Q9UDY6 481 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 IL36AQ9UHA7 158 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 IPO11Q9UI26 975 aaKnown RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 FZD4Q9ULV1 537 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 NCKAP1Q9Y2A7 1128 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 WASF2Q9Y6W5 498 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 EP300Q09472 2414 aaPredicted RBP9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 GVINP1Q7Z2Y8 2422 aa9.75□□□□□ -0.85
HCCAT5-201ENST00000569990 ABCA7Q8IZY2 2146 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 SPAG17Q6Q759 2223 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 ZNF292O60281 2723 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 GRID2IPA4D2P6 1211 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 KPNA3O00505 521 aaPredicted RBP9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 MAFKO60675 156 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 LEFTY1O75610 366 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 RNASEH2AO75792 299 aaKnown RBP9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 SEMA4FO95754 770 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 PEX11BO96011 259 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 ITPKAP23677 461 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 MPLP40238 635 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 MARCKSL1P49006 195 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 NAP1L1P55209 391 aaKnown RBP9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 RHOAP61586 193 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 SNRPD1P62314 119 aaKnown RBP9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 FOXK1P85037 733 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 CCZ1BP86790 482 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 CCZ1P86791 482 aaPredicted RBP9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 CREB5Q02930 508 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 SPEM2Q0P670 501 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 GALNT2Q10471 571 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 CNTN1Q12860 1018 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 RFTN1Q14699 578 aaPredicted RBP9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 POM121L1PQ3SYA9 428 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 PLA2G2CQ5R387 149 aa9.74□□□□□ -0.85
HCCAT5-201ENST00000569990 ATXN7L2Q5T6C5 722 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms