RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 RETSATQ6NUM9 610 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 ARHGAP36Q6ZRI8 547 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 SH2D3CQ8N5H7 860 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 NETO1Q8TDF5 533 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 RPL10LQ96L21 214 aaKnown RBP13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 WDR24Q96S15 920 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 GABRG3Q99928 467 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 HEMGNQ9BXL5 484 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 SMOC1Q9H4F8 434 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 SLCO3A1Q9UIG8 710 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 PLA2G4CQ9UP65 541 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 STON1Q9Y6Q2 735 aa13.12□□□□□ -0.31
CNEP1R1-211ENST00000569647 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 J3KR12 359 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 KCNK3O14649 394 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 FANCGO15287 622 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 ATP9BO43861 1147 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 MAFKO60675 156 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 MAP3K6O95382 1288 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 SRCP12931 536 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 GABRG2P18507 467 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 TGM2P21980 687 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 CETN2P41208 172 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 GARSP41250 739 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 GNG11P61952 73 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 CREB5Q02930 508 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 MAP7D1Q3KQU3 841 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 FNDC3BQ53EP0 1204 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 KIAA1211LQ6NV74 962 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 SERPINA13PQ6UXR4 307 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 LINGO4Q6UY18 593 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 FRS2Q8WU20 508 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 SPACA7Q96KW9 195 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 RTKNQ9BST9 563 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 IPO11Q9UI26 975 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 MBD1Q9UIS9 605 aaPredicted RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 HPCAL4Q9UM19 191 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 RAD54BQ9Y620 910 aa13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-211ENST00000569647 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 CACNA1EQ15878 2313 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 TTC34A8MYJ7 566 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 K7ERQ8 282 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 SLC30A4O14863 429 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 SMAD6O43541 496 aaKnown RBP13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 TJP3O95049 919 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 PEX11BO96011 259 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 APOC2P02655 101 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 NDUFV2P19404 249 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 CLCN6P51797 869 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 GEMIN4P57678 1058 aaKnown RBP13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 ST8SIA6P61647 398 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 IL10RBQ08334 325 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 SEL1L2Q5TEA6 688 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 TCEAL6Q6IPX3 200 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 ZNF354CQ86Y25 554 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 ATPAF2Q8N5M1 289 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 ZNF366Q8N895 744 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 HDAC11Q96DB2 347 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 ERLEC1Q96DZ1 483 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 TSGA13Q96PP4 275 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 SP110Q9HB58 689 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 VPS45Q9NRW7 570 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 RXFP3Q9NSD7 469 aa13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 SAE1Q9UBE0 346 aaPredicted RBP13.1□□□□□ -0.31
CNEP1R1-211ENST00000569647 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 MED19A0JLT2 244 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 HLA-EP13747 358 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 VAV1P15498 845 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 MX2P20592 715 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 CXCR5P32302 372 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 NNMTP40261 264 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 NR2C2P49116 596 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 CAMK2GQ13555 558 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 BYSLQ13895 437 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms