RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 HCN2Q9UL51 889 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 MMP17Q9ULZ9 603 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 ATP8A1Q9Y2Q0 1164 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 KCNN4O15554 427 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 SYNCRIPO60506 623 aaKnown RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 POP4O95707 220 aaKnown RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 IGSF6O95976 241 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 GAS8O95995 478 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 JCHAINP01591 159 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 COILP38432 576 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 IL12RB1P42701 662 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 STK19P49842 368 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 CAMK2GQ13555 558 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 C2orf27AQ580R0 203 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 CARD16Q5EG05 197 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 EMC10Q5UCC4 262 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 CCDC137Q6PK04 289 aaKnown RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 SYDE1Q6ZW31 735 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 SPEM1Q8N4L4 309 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 SPATA4Q8NEY3 305 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 CCHCR1Q8TD31 782 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 ATG4AQ8WYN0 398 aa23.83■■□□□ 1.41
RAB40C-212ENST00000569575 CPEB1Q9BZB8 566 aaKnown RBP23.83■■□□□ 1.41
RAB40C-212ENST00000569575 MUC22E2RYF6 1773 aaPredicted RBP23.83■■□□□ 1.4
RAB40C-212ENST00000569575 WASH3PC4AMC7 463 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 KCNK1O00180 336 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 TNFRSF10AO00220 468 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 ZBTB24O43167 697 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-212ENST00000569575 AOC1P19801 751 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 PTPN3P26045 913 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 AP1S1P61966 158 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 WASHC5Q12768 1159 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 ELAVL3Q14576 367 aaKnown RBP23.82■■□□□ 1.4
RAB40C-212ENST00000569575 SFTPA1Q8IWL2 248 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 CCDC33Q8N5R6 958 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 NETO2Q8NC67 525 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 RPLP0P6Q8NHW5 317 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 PTPRN2Q92932 1015 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 SPATA13Q96N96 652 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 NUDCD1Q96RS6 583 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 TUBGCP5Q96RT8 1024 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 TMEM121Q9BTD3 319 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 FOXQ1Q9C009 403 aa23.82■■□□□ 1.4
RAB40C-212ENST00000569575 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 A0A1W2PQ67 120 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 SGK1O00141 431 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 RNF103O00237 685 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 PDE2AO00408 941 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 SMAD6O43541 496 aaKnown RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 SLC34A2O95436 690 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 KLF8O95600 359 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 EPHX1P07099 455 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 VAV1P15498 845 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 DGKEP52429 567 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 SEC13P55735 322 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 SFSWAPQ12872 951 aaKnown RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 DHX34Q14147 1143 aaKnown RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 ALLCQ8N6M5 410 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 CCDC89Q8N998 374 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 TXNDC5Q8NBS9 432 aaKnown RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 HCAR2Q8TDS4 363 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 OR8D1Q8WZ84 308 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 L2HGDHQ9H9P8 463 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 LHX3Q9UBR4 397 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 FCF1Q9Y324 198 aaKnown RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 MTF2Q9Y483 593 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-212ENST00000569575 UNC80Q8N2C7 3258 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 TECTAO75443 2155 aa23.81■■□□□ 1.4
RAB40C-212ENST00000569575 TTC34A8MYJ7 566 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 K7ERQ8 282 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 RNASEH1O60930 286 aaKnown RBP23.8■■□□□ 1.4
RAB40C-212ENST00000569575 ZNF821O75541 412 aaPredicted RBP23.8■■□□□ 1.4
RAB40C-212ENST00000569575 HOXB2P14652 356 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 CR2P20023 1033 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 TUBB4BP68371 445 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 SNX1Q13596 522 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 GSTA5Q7RTV2 222 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 PID1Q7Z2X4 250 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 MAATS1Q7Z4T9 603 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 TSEN2Q8NCE0 465 aaKnown RBP23.8■■□□□ 1.4
RAB40C-212ENST00000569575 TMIEQ8NEW7 156 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 FLCNQ8NFG4 579 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 OR2A12Q8NGT7 310 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 LRRC45Q96CN5 670 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 HEPHQ9BQS7 1158 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 OSBPL1AQ9BXW6 950 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 SLC25A51Q9H1U9 297 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 POLMQ9NP87 494 aaPredicted RBP23.8■■□□□ 1.4
RAB40C-212ENST00000569575 VPS45Q9NRW7 570 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 CACNA2D2Q9NY47 1150 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 SEPT10Q9P0V9 454 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 PAK5Q9P286 719 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 KLHL8Q9P2G9 620 aaPredicted RBP23.8■■□□□ 1.4
RAB40C-212ENST00000569575 SCML1Q9UN30 329 aa23.8■■□□□ 1.4
RAB40C-212ENST00000569575 TTC28Q96AY4 2481 aa23.79■■□□□ 1.4
RAB40C-212ENST00000569575 CKAP5Q14008 2032 aa23.79■■□□□ 1.4
RAB40C-212ENST00000569575 CTAGE15A4D2H0 777 aa23.79■■□□□ 1.4
RAB40C-212ENST00000569575 GOLGA6CA6NDK9 693 aa23.79■■□□□ 1.4
RAB40C-212ENST00000569575 GOLGA6BA6NDN3 693 aa23.79■■□□□ 1.4
RAB40C-212ENST00000569575 PRNPP04156 253 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms