RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ARSIQ5FYB1 569 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 STPG1Q5TH74 334 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 TXNRD3NBQ6F5E7 133 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 NCEH1Q6PIU2 408 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 POLNQ7Z5Q5 900 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 LZTR1Q8N653 840 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 CHST14Q8NCH0 376 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 SLC35G2Q8TBE7 412 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 SNX19Q92543 992 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 HEPHQ9BQS7 1158 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 EDEM2Q9BV94 578 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 SLC39A8Q9C0K1 460 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 KLC2Q9H0B6 622 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 CAPN10Q9HC96 672 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 OSGEPQ9NPF4 335 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 DYRK4Q9NR20 520 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 HECAQ9UBI9 543 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 INTUQ9ULD6 942 aa14.07□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3IA0A087WXS9 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3EA0A087X179 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3KA0A087X1G2 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3FA6NER0 549 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 KPNA3O00505 521 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 BCAT2O15382 392 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 LEFTY1O75610 366 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 GSRP00390 522 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 SYPP08247 313 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3HP0C7X1 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 ENGP17813 658 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 ADPRHP54922 357 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 SNRPD1P62314 119 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 CNTN1Q12860 1018 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 DPYSQ14117 519 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3GQ6DHY5 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 LEKR1Q6ZMV7 388 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 ZCCHC9Q8N567 271 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 OR2AP1Q8NGE2 309 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 C1orf216Q8TAB5 229 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 PPP1R16AQ96I34 528 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 LRIG1Q96JA1 1093 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TM6SF2Q9BZW4 377 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 TPX2Q9ULW0 747 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 WASF2Q9Y6W5 498 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 DNAH14Q0VDD8 3507 aa14.06□□□□□ -0.16
HERPUD1-218ENST00000569569 C4orf47A7E2U8 309 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 C10orf142B7Z368 130 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 PLK4O00444 970 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 ARHGAP33O14559 1287 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 TMCC1O94876 653 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 POP4O95707 220 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 IGHV4-34P06331 123 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 AMPD1P23109 780 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 CD27P26842 260 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 MAN1A1P33908 653 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 ARHGAP25P42331 645 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 PAPOLAP51003 745 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 CCR5P51681 352 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 CDH6P55285 790 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 KRT81Q14533 505 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 MESDQ14696 234 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 AGBL4Q5VU57 503 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 AFMIDQ63HM1 303 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 ARHGAP12Q8IWW6 846 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 CCDC170Q8IYT3 715 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 RYBPQ8N488 228 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 FAM71BQ8TC56 605 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 GRIN3AQ8TCU5 1115 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 RFFLQ8WZ73 363 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 ARRDC3Q96B67 414 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 CSPG4P5Q96PW8 444 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 PANX2Q96RD6 677 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 PCDH18Q9HCL0 1135 aa14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 RCOR3Q9P2K3 495 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 UBA2Q9UBT2 640 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-218ENST00000569569 A0A1W2PPC4 97 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 J3KR12 359 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 PRAMEF11O60813 436 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 MTA2O94776 668 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 LCA5LO95447 670 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 KRT7P08729 469 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 CYLC1P35663 651 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 MAGEA1P43355 309 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 RHOAP61586 193 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 RAD51Q06609 339 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 TCEAL1Q15170 157 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms