RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
CNOT1-213ENST00000568158 GSDMDP57764 484 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 CNTN1Q12860 1018 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 SF3A2Q15428 464 aaKnown RBP13.23□□□□□ -0.29
CNOT1-213ENST00000568158 MYLK3Q32MK0 819 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 SPDYCQ5MJ68 293 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 FAM46CQ5VWP2 391 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 LYSMD4Q5XG99 296 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 USP30Q70CQ3 517 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 DSG4Q86SJ6 1040 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 KIAA1328Q86T90 577 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 MAP7D3Q8IWC1 876 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 PLPP6Q8IY26 295 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 RGL4Q8IZJ4 473 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 PQLC3Q8N755 202 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 TMIEQ8NEW7 156 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 TPCN2Q8NHX9 752 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 ARRDC3Q96B67 414 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 CCDC114Q96M63 670 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 RNF157Q96PX1 679 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 SEMA4GQ9NTN9 838 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 RCOR3Q9P2K3 495 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-213ENST00000568158 UBA2Q9UBT2 640 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-213ENST00000568158 IL36AQ9UHA7 158 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 EVLQ9UI08 416 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-213ENST00000568158 IPO11Q9UI26 975 aaKnown RBP13.23□□□□□ -0.29
CNOT1-213ENST00000568158 WASF2Q9Y6W5 498 aa13.23□□□□□ -0.29
CNOT1-213ENST00000568158 EP300Q09472 2414 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 FAM186AA6NE01 2351 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 ATXN2Q99700 1313 aaKnown RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 LRRD1A4D1F6 860 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 C3orf70A6NLC5 250 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 PATE3B3GLJ2 98 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 INSIG1O15503 277 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 MAP3K6O95382 1288 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SEMA4FO95754 770 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 ZNF806P0C7X5 589 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 RHOAP61586 193 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SNRPD1P62314 119 aaKnown RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 IL10RBQ08334 325 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SLC10A2Q12908 348 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 LLGL1Q15334 1064 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 PLA2G2CQ5R387 149 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 LRRC38Q5VT99 294 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 DCAF12L1Q5VU92 463 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 NCBP2-AS2Q69YL0 99 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 CADM4Q8NFZ8 388 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 OR2AP1Q8NGE2 309 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 OR14C36Q8NHC7 312 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 LRRN4Q8WUT4 740 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 VOPP1Q96AW1 172 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 ZDHHC6Q9H6R6 413 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SP110Q9HB58 689 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SGK2Q9HBY8 427 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 LHX3Q9UBR4 397 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 TRIM10Q9UDY6 481 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 PILRBQ9UKJ0 227 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 PCDHGA5Q9Y5G8 931 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 TNRC6BQ9UPQ9 1833 aaKnown RBP13.22□□□□□ -0.29
CNOT1-213ENST00000568158 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
CNOT1-213ENST00000568158 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 PI4KAP42356 2102 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 BTNL10A8MVZ5 291 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 KRIT1O00522 736 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 MAFKO60675 156 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 PALMO75781 387 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 FSBPO95073 299 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 POP4O95707 220 aaKnown RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 GSRP00390 522 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 PRNPP04156 253 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 KRT1P04264 644 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 SLC10A7Q0GE19 358 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 PAFAH1B3Q15102 231 aaKnown RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 CSRP2Q16527 193 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 NCEH1Q6PIU2 408 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 MFSD7Q6UXD7 560 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 DAAM2Q86T65 1068 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 SYT12Q8IV01 421 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms