RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 RYBPQ8N488 228 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 OR2AP1Q8NGE2 309 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 GAB3Q8WWW8 586 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 ALG3Q92685 438 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 ERLEC1Q96DZ1 483 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 LRIG1Q96JA1 1093 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 FERMT1Q9BQL6 677 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 OSBPL1AQ9BXW6 950 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 OSBPL8Q9BZF1 889 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 TM6SF2Q9BZW4 377 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CARD9Q9H257 536 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 TNKS2Q9H2K2 1166 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 POLR3BQ9NW08 1133 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 DTLQ9NZJ0 730 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 SEPT3Q9UH03 358 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 IL36AQ9UHA7 158 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 NCKAP1Q9Y2A7 1128 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CEP192Q8TEP8 1941 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 MUC6Q6W4X9 2439 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 SPAG17Q6Q759 2223 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 MAFKO60675 156 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 C7P10643 843 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 KRT10P13645 584 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 VAV1P15498 845 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 C5AR1P21730 350 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 CCNCP24863 283 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 OXTRP30559 389 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 PSMD8P48556 350 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 CCNHP51946 323 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 RPS14P62263 151 aaKnown RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 PPIDQ08752 370 aaKnown RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 MARC1Q5VT66 337 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 ARHGAP36Q6ZRI8 547 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 USP30Q70CQ3 517 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 REXO1L1PQ8IX06 675 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 CCDC13Q8IYE1 715 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 CCNYQ8ND76 341 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 FATE1Q969F0 183 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 OLFM3Q96PB7 478 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 TSGA13Q96PP4 275 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 PSKH2Q96QS6 385 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 HEPHQ9BQS7 1158 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 SEMA4AQ9H3S1 761 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 DYRK4Q9NR20 520 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 USP36Q9P275 1121 aaKnown RBP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 AMACRQ9UHK6 382 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 JRKLQ9Y4A0 524 aa12.37□□□□□ -0.43
SF3B3-208ENST00000567250 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
SF3B3-208ENST00000567250 MATN3O15232 486 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 MTSS1O43312 755 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 LILRB5O75023 590 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 MAP3K6O95382 1288 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 PYGMP11217 842 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 CHRNA3P32297 505 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 P2RY2P41231 377 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 MMP13P45452 471 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 DMWDQ09019 674 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 HNRNPDQ14103 355 aaKnown RBP12.36□□□□□ -0.43
SF3B3-208ENST00000567250 RALGPS1Q5JS13 557 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 SLC36A4Q6YBV0 504 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 DPY19L3Q6ZPD9 716 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 CEP68Q76N32 757 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 MMAAQ8IVH4 418 aaKnown RBP12.36□□□□□ -0.43
SF3B3-208ENST00000567250 NETO2Q8NC67 525 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 TMIEQ8NEW7 156 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 GRIN3AQ8TCU5 1115 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 GANCQ8TET4 914 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 HAUS1Q96CS2 278 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 PABPC3Q9H361 631 aaKnown RBP12.36□□□□□ -0.43
SF3B3-208ENST00000567250 ZDHHC6Q9H6R6 413 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 TRMT1Q9NXH9 659 aaKnown RBP12.36□□□□□ -0.43
SF3B3-208ENST00000567250 HECAQ9UBI9 543 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-208ENST00000567250 LHX3Q9UBR4 397 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 RAB23Q9ULC3 237 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 FZD4Q9ULV1 537 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 ACTL7AQ9Y615 435 aa12.36□□□□□ -0.43
SF3B3-208ENST00000567250 HACD1B0YJ81 288 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 KPNA3O00505 521 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 KRIT1O00522 736 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 KCNK3O14649 394 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 SLC7A4O43246 635 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 ZNF821O75541 412 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 POP4O95707 220 aaKnown RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 IGLV3-19P01714 112 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 CD6P30203 668 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 SLC8A1P32418 973 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 NBL1P41271 181 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 CSNK1DP48730 415 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 TPMTP51580 245 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 AP1S1P61966 158 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 NSUN2Q08J23 767 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms