RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 DNAAF5Q86Y56 855 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 CHST14Q8NCH0 376 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 CPLX3Q8WVH0 158 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 CASKIN2Q8WXE0 1202 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 ZNF653Q96CK0 615 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 PPP1R16AQ96I34 528 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 LRIG1Q96JA1 1093 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 TRIM7Q9C029 511 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 TM7SF3Q9NS93 570 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 ARHGAP20Q9P2F6 1191 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 AP4E1Q9UPM8 1137 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 DMTF1Q9Y222 760 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 SNX11Q9Y5W9 270 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 WASF2Q9Y6W5 498 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 A0A1W2PR77 199 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 LEFTY1O75610 366 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 GSRP00390 522 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 CD38P28907 300 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 MIPP30301 263 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 PCK1P35558 622 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 HCAR3P49019 387 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 NDST2P52849 883 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 TPI1P60174 286 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 PPP2CBP62714 309 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 PPP2CAP67775 309 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 SERINC3Q13530 473 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 ZNF423Q2M1K9 1284 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 KCNT1Q5JUK3 1230 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 CYP4V2Q6ZWL3 525 aaPredicted RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 IQCHQ86VS3 1027 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 ARRDC3Q96B67 414 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 SERAC1Q96JX3 654 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 SLC6A18Q96N87 628 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 XPO4Q9C0E2 1151 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 DYRK4Q9NR20 520 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 HECAQ9UBI9 543 aaPredicted RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 ACTL7AQ9Y615 435 aa12.87□□□□□ -0.35
LPCAT4-206ENST00000566581 IGF2RP11717 2491 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 A0A087X0T9 212 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 RASA4BC9J798 803 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 RNF103O00237 685 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 RASA4O43374 803 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 SH3BP5O60239 455 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 PCDHGA12O60330 932 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 RNGTTO60942 597 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 CBFA2T3O75081 653 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 LRCH4O75427 683 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 WNT1P04628 370 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 FAM228BP0C875 321 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 ITGB7P26010 798 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 CASP14P31944 242 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 DNA2P51530 1060 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 C21orf59P57076 290 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 SNRPD1P62314 119 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 OVGP1Q12889 678 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 PIGHQ14442 188 aaPredicted RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 SUZ12Q15022 739 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 SETMARQ53H47 684 aaPredicted RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 SLC45A4Q5BKX6 768 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 NAPEPLDQ6IQ20 393 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 NAXDQ8IW45 347 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 NIPA2Q8N8Q9 360 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 MFSD2AQ8NA29 543 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 OR2AP1Q8NGE2 309 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 GRIN3AQ8TCU5 1115 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 PEBP4Q96S96 227 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 SNRNP25Q9BV90 132 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 TSPY26PQ9H489 355 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 DHX35Q9H5Z1 703 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 LRRC19Q9H756 370 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 AASDHPPTQ9NRN7 309 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 PCSK1NQ9UHG2 260 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 WASF3Q9UPY6 502 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 USP24Q9UPU5 2620 aa12.86□□□□□ -0.35
LPCAT4-206ENST00000566581 ACACAQ13085 2346 aa12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 PRAMEF26H0Y7S4 382 aa12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 TLR4O00206 839 aa12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 EEF2KO00418 725 aaKnown RBP12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 WNT9AO14904 365 aa12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 FLRT2O43155 660 aa12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 BUB1O43683 1085 aa12.85□□□□□ -0.35
LPCAT4-206ENST00000566581 AP1G1O43747 822 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms