RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LIFRP42702 1097 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 GPR12P47775 334 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 ALKBH1Q13686 389 aaKnown RBP2.42□□□□□ -2.02
SMG1-212ENST00000566328 SYT16Q17RD7 645 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 TBRG1Q3YBR2 411 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 C14orf177Q52M58 125 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 DCAF6Q58WW2 860 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 CYB5RLQ6IPT4 315 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 WDR5BQ86VZ2 330 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 OR1N1Q8NGS0 311 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 RFWD2Q8NHY2 731 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 BRI3BPQ8WY22 251 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 ZNF566Q969W8 418 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 ANKRD9Q96BM1 317 aaPredicted RBP2.42□□□□□ -2.02
SMG1-212ENST00000566328 CADM1Q9BY67 442 aaKnown RBP2.42□□□□□ -2.02
SMG1-212ENST00000566328 BARHL1Q9BZE3 327 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 LIN7CQ9NUP9 197 aaKnown RBP2.42□□□□□ -2.02
SMG1-212ENST00000566328 HERC5Q9UII4 1024 aaKnown RBP2.42□□□□□ -2.02
SMG1-212ENST00000566328 EID1Q9Y6B2 187 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 A0A096LPK6 155 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 SLC38A8A6NNN8 435 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 HNRNPCL2B2RXH8 293 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 CCNT1O60563 726 aaKnown RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 SLC22A3O75751 556 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 PMS2P2O95744 297 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 DDAH2O95865 285 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 IGHV4-30-4P0DP06 118 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 CETPP11597 493 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 PRPH2P23942 346 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 EEF1GP26641 437 aaKnown RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 AKT1P31749 480 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 PRIM2P49643 509 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 HSD17B4P51659 736 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 ZNF132P52740 706 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 RCAN1P53805 252 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 FAM3BP58499 235 aaPredicted RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 NLRP5P59047 1200 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 SF3A3Q12874 501 aaKnown RBP eCLIP2.41□□□□□ -2.02
SMG1-212ENST00000566328 DHX34Q14147 1143 aaKnown RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 GALEQ14376 348 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 AADACL2Q6P093 401 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 SLC26A9Q7LBE3 791 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 RAVER1Q8IY67 606 aaKnown RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 GRAPLQ8TC17 118 aaPredicted RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 TBC1D22AQ8WUA7 517 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 HMGB4Q8WW32 186 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 TEFMQ96QE5 360 aaKnown RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 RBM4Q9BWF3 364 aaKnown RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 LHPPQ9H008 270 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 EBF2Q9HAK2 575 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 PDE11AQ9HCR9 933 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 ZNF334Q9HCZ1 680 aaPredicted RBP2.41□□□□□ -2.02
SMG1-212ENST00000566328 DDX21Q9NR30 783 aaKnown RBP eCLIP2.41□□□□□ -2.02
SMG1-212ENST00000566328 TMEM51Q9NW97 253 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 SMARCAL1Q9NZC9 954 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 LRFN1Q9P244 771 aa2.41□□□□□ -2.02
SMG1-212ENST00000566328 DDTLA6NHG4 134 aaPredicted RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 NPIPB11E5RHQ5 1161 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 CHL1O00533 1208 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 TSPAN6O43657 245 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 TIPRLO75663 272 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 FGF18O76093 207 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 VNN2O95498 520 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 S100BP04271 92 aaPredicted RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 HARSP12081 509 aaKnown RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 NPPBP16860 134 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 MCM3P25205 808 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 KLRK1P26718 216 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 YWHAQP27348 245 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 TYK2P29597 1187 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 KRT2P35908 639 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 SKIV2L2P42285 1042 aaKnown RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 DPP6P42658 865 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 CYP4A11Q02928 519 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 RAB30Q15771 203 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 HIBCHQ6NVY1 386 aaPredicted RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 MTFR2Q6P444 385 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 C19orf48Q6RUI8 117 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 RINLQ6ZS11 566 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 LYG1Q8N1E2 194 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 KCNH5Q8NCM2 988 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 RSC1A1Q92681 617 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 MOV10L1Q9BXT6 1211 aaKnown RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 HDHD5Q9BXW7 423 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 NPFFR1Q9GZQ6 430 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 CLK4Q9HAZ1 481 aaKnown RBP2.4□□□□□ -2.03
SMG1-212ENST00000566328 VDAC3Q9Y277 283 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 PCDHA10Q9Y5I2 948 aa2.4□□□□□ -2.03
SMG1-212ENST00000566328 AGAP5A6NIR3 686 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 AMBPP02760 352 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 MYF6P23409 242 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 CDK18Q07002 472 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 PMS2P11Q13670 270 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 SLC35G1Q2M3R5 365 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 GXYLT1Q4G148 440 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 DPP9Q86TI2 863 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 SFR1Q86XK3 245 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 VPS52Q8N1B4 723 aa2.39□□□□□ -2.03
SMG1-212ENST00000566328 GALNT15Q8N3T1 639 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms