RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TMEM248Q9NWD8 314 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 ADAM22Q9P0K1 906 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 ADAMTS20P59510 1910 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 ITPR1Q14643 2758 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 LRRC10BA6NIK2 292 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 MAGEC1O60732 1142 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 LRIG2O94898 1065 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 KRT3P12035 628 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 RHOQP17081 205 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 CCDC15Q0P6D6 951 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 CAMK2BQ13554 666 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 CARD16Q5EG05 197 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 RWDD4Q6NW29 188 aaKnown RBP18.68■□□□□ 0.58
USB1-213ENST00000566292 WDR59Q6PJI9 974 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 MON1BQ7L1V2 547 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 FAM172AQ8WUF8 416 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 ARHGEF2Q92974 986 aaKnown RBP18.68■□□□□ 0.58
USB1-213ENST00000566292 KLHDC7BQ96G42 594 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 ERGIC2Q96RQ1 377 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 CCDC86Q9H6F5 360 aaKnown RBP18.68■□□□□ 0.58
USB1-213ENST00000566292 FZD3Q9NPG1 666 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 DNAI1Q9UI46 699 aa18.68■□□□□ 0.58
USB1-213ENST00000566292 TCRBV5S1A1TA0A578 114 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 PLEKP08567 350 aaPredicted RBP18.67■□□□□ 0.58
USB1-213ENST00000566292 GPD1P21695 349 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 MAPKAPK2P49137 400 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 DNA2P51530 1060 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 CCNHP51946 323 aaPredicted RBP18.67■□□□□ 0.58
USB1-213ENST00000566292 SEL1L3Q68CR1 1132 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 C3orf20Q8ND61 904 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 TSC1Q92574 1164 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 NTAN1Q96AB6 310 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 TBC1D31Q96DN5 1066 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 PPP1R16AQ96I34 528 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 HEPHQ9BQS7 1158 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 SELENOOQ9BVL4 669 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 PCDHGA1Q9Y5H4 931 aa18.67■□□□□ 0.58
USB1-213ENST00000566292 SDC3O75056 442 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 PCDH8O95206 1070 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 CALB1P05937 261 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 THEGLP0DJG4 465 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 ADRB3P13945 408 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 CDK11BP21127 795 aaKnown RBP18.66■□□□□ 0.58
USB1-213ENST00000566292 ITGB7P26010 798 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 ACADVLP49748 655 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 NEK3P51956 506 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 CLDN6P56747 220 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 TMEM259Q4ZIN3 620 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 PYROXD2Q8N2H3 581 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 OR13H1Q8NG92 308 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 VOPP1Q96AW1 172 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 AGPAT1Q99943 283 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 TM6SF2Q9BZW4 377 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 RETREG1Q9H6L5 497 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 CAAP1Q9H8G2 361 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 SEPT11Q9NVA2 429 aaKnown RBP18.66■□□□□ 0.58
USB1-213ENST00000566292 NBEAQ8NFP9 2946 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 CELSR3Q9NYQ7 3312 aa18.66■□□□□ 0.58
USB1-213ENST00000566292 CXorf51AA0A1B0GTR3 108 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 TRABD2BA6NFA1 517 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 SIGLEC16A6NMB1 481 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 RFPL3O75679 317 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 ATP1A3P13637 1013 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 HNRNPA2B1P22626 353 aaKnown RBP18.65■□□□□ 0.58
USB1-213ENST00000566292 AKT2P31751 481 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 L1CAMP32004 1257 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 GKP32189 559 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 ETFBP38117 255 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 CLDN2P57739 230 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 FGL2Q14314 439 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 GCNT7Q6ZNI0 430 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 PARS2Q7L3T8 475 aaKnown RBP18.65■□□□□ 0.58
USB1-213ENST00000566292 PLPP6Q8IY26 295 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 OR6K2Q8NGY2 324 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 ISG20Q96AZ6 181 aaKnown RBP18.65■□□□□ 0.58
USB1-213ENST00000566292 MAGEH1Q9H213 219 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 ZDHHC6Q9H6R6 413 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 HECAQ9UBI9 543 aaPredicted RBP18.65■□□□□ 0.58
USB1-213ENST00000566292 FADS3Q9Y5Q0 445 aa18.65■□□□□ 0.58
USB1-213ENST00000566292 CCP110O43303 1012 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 RAMP2O60895 175 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 C1SP09871 688 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 RPL7AP62424 266 aaKnown RBP18.64■□□□□ 0.57
USB1-213ENST00000566292 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
USB1-213ENST00000566292 CCDC183Q5T5S1 534 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 LEKR1Q6ZMV7 388 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 ABI3BPQ7Z7G0 1075 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 SLFN11Q7Z7L1 901 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 TMPRSS12Q86WS5 348 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 SLC22A18ASQ8N1D0 253 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 SLC25A45Q8N413 288 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 AOPEPQ8N6M6 819 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 NOL6Q9H6R4 1146 aaKnown RBP18.64■□□□□ 0.57
USB1-213ENST00000566292 DKK4Q9UBT3 224 aa18.64■□□□□ 0.57
USB1-213ENST00000566292 GOLGA6L22H0YM25 854 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 TRIM38O00635 465 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 TEX33O43247 280 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 ABL2P42684 1182 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 ZNF143P52747 638 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms